RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
ZNF550-207ENST00000595560 RXRAP19793 462 aa18.28■□□□□ 0.52
ZNF550-207ENST00000595560 FSCN1Q16658 493 aaKnown RBP18.28■□□□□ 0.52
ZNF550-207ENST00000595560 MICU3Q86XE3 530 aa18.28■□□□□ 0.52
ZNF550-207ENST00000595560 SCFD2Q8WU76 684 aa18.28■□□□□ 0.52
ZNF550-207ENST00000595560 RRP36Q96EU6 259 aaKnown RBP18.28■□□□□ 0.52
ZNF550-207ENST00000595560 GLT1D1Q96MS3 346 aa18.28■□□□□ 0.52
ZNF550-207ENST00000595560 DYNC1LI2O43237 492 aaPredicted RBP18.27■□□□□ 0.52
ZNF550-207ENST00000595560 PTGS1P23219 599 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 BMP8BP34820 402 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 MAGEA10P43363 369 aaPredicted RBP18.27■□□□□ 0.52
ZNF550-207ENST00000595560 BEX3Q00994 111 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 TMEM63BQ5T3F8 832 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 ARHGEF16Q5VV41 709 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 SYNE3Q6ZMZ3 975 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.52
ZNF550-207ENST00000595560 FANCBQ8NB91 859 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 TCEANC2Q96MN5 208 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 PXMP2Q9NR77 195 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 PRKAG2Q9UGJ0 569 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 SEC63Q9UGP8 760 aaKnown RBP18.27■□□□□ 0.52
ZNF550-207ENST00000595560 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
ZNF550-207ENST00000595560 NKRFO15226 690 aaKnown RBP eCLIP18.26■□□□□ 0.51
ZNF550-207ENST00000595560 TLE2Q04725 743 aa18.26■□□□□ 0.51
ZNF550-207ENST00000595560 PPP2R5BQ15173 497 aa18.26■□□□□ 0.51
ZNF550-207ENST00000595560 STXBP2Q15833 593 aa18.26■□□□□ 0.51
ZNF550-207ENST00000595560 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
ZNF550-207ENST00000595560 ANKRD33Q7Z3H0 272 aa18.26■□□□□ 0.51
ZNF550-207ENST00000595560 RAB11FIP4Q86YS3 637 aa18.26■□□□□ 0.51
ZNF550-207ENST00000595560 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
ZNF550-207ENST00000595560 PDLIM7Q9NR12 457 aa18.26■□□□□ 0.51
ZNF550-207ENST00000595560 GCOM1H8Y6P7 765 aaPredicted RBP18.25■□□□□ 0.51
ZNF550-207ENST00000595560 ZEB2O60315 1214 aa18.25■□□□□ 0.51
ZNF550-207ENST00000595560 CABYRO75952 493 aa18.25■□□□□ 0.51
ZNF550-207ENST00000595560 POLR2MP0CAP2 368 aa18.25■□□□□ 0.51
ZNF550-207ENST00000595560 EIF2AK2P19525 551 aaKnown RBP18.25■□□□□ 0.51
ZNF550-207ENST00000595560 HOXA13P31271 388 aaPredicted RBP18.25■□□□□ 0.51
ZNF550-207ENST00000595560 RCAN1P53805 252 aa18.25■□□□□ 0.51
ZNF550-207ENST00000595560 TTLL4Q14679 1199 aa18.25■□□□□ 0.51
ZNF550-207ENST00000595560 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
ZNF550-207ENST00000595560 TOX2Q96NM4 488 aa18.25■□□□□ 0.51
ZNF550-207ENST00000595560 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
ZNF550-207ENST00000595560 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
ZNF550-207ENST00000595560 MROH7Q68CQ1 1323 aa18.24■□□□□ 0.51
ZNF550-207ENST00000595560 A0A0U1RQG5 324 aaPredicted RBP18.24■□□□□ 0.51
ZNF550-207ENST00000595560 ZBTB43O43298 467 aa18.24■□□□□ 0.51
ZNF550-207ENST00000595560 NR3C2P08235 984 aa18.24■□□□□ 0.51
ZNF550-207ENST00000595560 BLOC1S2Q6QNY1 142 aa18.24■□□□□ 0.51
ZNF550-207ENST00000595560 CXCL17Q6UXB2 119 aa18.24■□□□□ 0.51
ZNF550-207ENST00000595560 CMTR1Q8N1G2 835 aaKnown RBP18.24■□□□□ 0.51
ZNF550-207ENST00000595560 PDCD2LQ9BRP1 358 aa18.24■□□□□ 0.51
ZNF550-207ENST00000595560 PQBP1O60828 265 aaKnown RBP18.23■□□□□ 0.51
ZNF550-207ENST00000595560 EIF3JO75822 258 aaKnown RBP18.23■□□□□ 0.51
ZNF550-207ENST00000595560 ARIH2O95376 493 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 CLTBP09497 229 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 TXNP10599 105 aaKnown RBP18.23■□□□□ 0.51
ZNF550-207ENST00000595560 CPT1AP50416 773 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 CDK7P50613 346 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 FXR1P51114 621 aaKnown RBP eCLIP18.23■□□□□ 0.51
ZNF550-207ENST00000595560 CCDC62Q6P9F0 684 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 FBXL16Q8N461 479 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 OR6J1Q8NGC5 347 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 LBHD1Q9BQE6 289 aaPredicted RBP18.23■□□□□ 0.51
ZNF550-207ENST00000595560 PRDM5Q9NQX1 630 aaPredicted RBP18.23■□□□□ 0.51
ZNF550-207ENST00000595560 LAMA3Q16787 3333 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 FRMPD4Q14CM0 1322 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 CNTNAP5Q8WYK1 1306 aa18.23■□□□□ 0.51
ZNF550-207ENST00000595560 SCN10AQ9Y5Y9 1956 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 KLF18A0A0U1RQI7 1052 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 DCDC2CA8MYV0 355 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 ARVCFO00192 962 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 CPA1P15085 419 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 RPS6KB1P23443 525 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 PSMA5P28066 241 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 FGD1P98174 961 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 MDM2Q00987 491 aaPredicted RBP18.22■□□□□ 0.51
ZNF550-207ENST00000595560 PGM5Q15124 567 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 RTN1Q16799 776 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 SEPT14Q6ZU15 432 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 SH3RF1Q7Z6J0 888 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 VTI1AQ96AJ9 217 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 USP26Q9BXU7 913 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 POLR3EQ9NVU0 708 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 PCDH10Q9P2E7 1040 aa18.22■□□□□ 0.51
ZNF550-207ENST00000595560 MYH7BA7E2Y1 1941 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 NID2Q14112 1375 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 TRIM43BA6NCK2 446 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 A6NJR5 290 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 PIK3CDO00329 1044 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 KIAA0355O15063 1070 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 CASTP20810 708 aaKnown RBP18.21■□□□□ 0.51
ZNF550-207ENST00000595560 FAAP100Q0VG06 881 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 FUT2Q10981 343 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 BRDTQ58F21 947 aaPredicted RBP18.21■□□□□ 0.51
ZNF550-207ENST00000595560 Q6ZUG5 572 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 VSIG10LQ86VR7 867 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 SLC43A3Q8NBI5 491 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 IL31RAQ8NI17 732 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms