RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 TRAF1Q13077 416 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 RNF20Q5VTR2 975 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 SLC43A3Q8NBI5 491 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 BADQ92934 168 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 VTI1AQ96AJ9 217 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 IWS1Q96ST2 819 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 MYL10Q9BUA6 226 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 TMEM39AQ9NV64 488 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 MAP3K20Q9NYL2 800 aaKnown RBP18.6■□□□□ 0.57
IRF3-210ENST00000595240 LTBP2Q14767 1821 aa18.6■□□□□ 0.57
IRF3-210ENST00000595240 NKRFO15226 690 aaKnown RBP eCLIP18.59■□□□□ 0.57
IRF3-210ENST00000595240 CFBP00751 764 aa18.59■□□□□ 0.57
IRF3-210ENST00000595240 KIF5BP33176 963 aa18.59■□□□□ 0.57
IRF3-210ENST00000595240 PPP2R5BQ15173 497 aa18.59■□□□□ 0.57
IRF3-210ENST00000595240 SAMD3Q8N6K7 520 aa18.59■□□□□ 0.57
IRF3-210ENST00000595240 CTCFLQ8NI51 663 aaPredicted RBP18.59■□□□□ 0.57
IRF3-210ENST00000595240 LRCH3Q96II8 777 aa18.59■□□□□ 0.57
IRF3-210ENST00000595240 SPZ1Q9BXG8 430 aa18.59■□□□□ 0.57
IRF3-210ENST00000595240 TBX21Q9UL17 535 aa18.59■□□□□ 0.57
IRF3-210ENST00000595240 GRIN2DO15399 1336 aa18.58■□□□□ 0.57
IRF3-210ENST00000595240 SMARCA1P28370 1054 aa18.58■□□□□ 0.56
IRF3-210ENST00000595240 TSGA10IPQ3SY00 556 aa18.58■□□□□ 0.56
IRF3-210ENST00000595240 ARHGEF16Q5VV41 709 aa18.58■□□□□ 0.56
IRF3-210ENST00000595240 CCDC62Q6P9F0 684 aa18.58■□□□□ 0.56
IRF3-210ENST00000595240 NFXL1Q6ZNB6 911 aa18.58■□□□□ 0.56
IRF3-210ENST00000595240 FAM126BQ8IXS8 530 aa18.58■□□□□ 0.56
IRF3-210ENST00000595240 OR6J1Q8NGC5 347 aa18.58■□□□□ 0.56
IRF3-210ENST00000595240 PXMP2Q9NR77 195 aa18.58■□□□□ 0.56
IRF3-210ENST00000595240 CCDC69A6NI79 296 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 ARIH2O95376 493 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 NEFLP07196 543 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 TXNP10599 105 aaKnown RBP18.57■□□□□ 0.56
IRF3-210ENST00000595240 RAG1P15918 1043 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 EIF2AK2P19525 551 aaKnown RBP18.57■□□□□ 0.56
IRF3-210ENST00000595240 CPT1AP50416 773 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 ITGA7Q13683 1181 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 TTLL4Q14679 1199 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 STXBP2Q15833 593 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 LZTS2Q9BRK4 669 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 SEZ6LQ9BYH1 1024 aa18.57■□□□□ 0.56
IRF3-210ENST00000595240 EIF3JO75822 258 aaKnown RBP18.56■□□□□ 0.56
IRF3-210ENST00000595240 CD4P01730 458 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 NR3C2P08235 984 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 CALM1P0DP23 149 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 CALM2P0DP24 149 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 CALM3P0DP25 149 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 HOXA13P31271 388 aaPredicted RBP18.56■□□□□ 0.56
IRF3-210ENST00000595240 GNAQP50148 359 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 GPR153Q6NV75 609 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 SGMS1Q86VZ5 419 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 RASEFQ8IZ41 740 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 COPS5Q92905 334 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 NEK1Q96PY6 1258 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 LRRC2Q9BYS8 371 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 POLR3EQ9NVU0 708 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 SLC12A7Q9Y666 1083 aa18.56■□□□□ 0.56
IRF3-210ENST00000595240 A6NJR5 290 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 GCOM1H8Y6P7 765 aaPredicted RBP18.55■□□□□ 0.56
IRF3-210ENST00000595240 TLR3O15455 904 aaKnown RBP18.55■□□□□ 0.56
IRF3-210ENST00000595240 PLEKHA8P1O95397 391 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 TIMP1P01033 207 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 POLR2MP0CAP2 368 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 PSMC6P62333 389 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 PURAQ00577 322 aaKnown RBP18.55■□□□□ 0.56
IRF3-210ENST00000595240 EXOSC10Q01780 885 aaKnown RBP18.55■□□□□ 0.56
IRF3-210ENST00000595240 SHHQ15465 462 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 SEPT14Q6ZU15 432 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 SRBD1Q8N5C6 995 aaKnown RBP18.55■□□□□ 0.56
IRF3-210ENST00000595240 PIBF1Q8WXW3 757 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
IRF3-210ENST00000595240 PDCD2LQ9BRP1 358 aa18.55■□□□□ 0.56
IRF3-210ENST00000595240 RXRAP19793 462 aa18.54■□□□□ 0.56
IRF3-210ENST00000595240 EPHB4P54760 987 aa18.54■□□□□ 0.56
IRF3-210ENST00000595240 KRT32Q14532 448 aa18.54■□□□□ 0.56
IRF3-210ENST00000595240 ADCK5Q3MIX3 580 aa18.54■□□□□ 0.56
IRF3-210ENST00000595240 BRDTQ58F21 947 aaPredicted RBP18.54■□□□□ 0.56
IRF3-210ENST00000595240 C9orf50Q5SZB4 431 aa18.54■□□□□ 0.56
IRF3-210ENST00000595240 DHX32Q7L7V1 743 aaKnown RBP18.54■□□□□ 0.56
IRF3-210ENST00000595240 KCNB2Q92953 911 aa18.54■□□□□ 0.56
IRF3-210ENST00000595240 MTG1Q9BT17 334 aaPredicted RBP18.54■□□□□ 0.56
IRF3-210ENST00000595240 MYH6P13533 1939 aa18.54■□□□□ 0.56
IRF3-210ENST00000595240 BAZ2BQ9UIF8 2168 aaKnown RBP18.54■□□□□ 0.56
IRF3-210ENST00000595240 KPNA6O60684 536 aa18.53■□□□□ 0.56
IRF3-210ENST00000595240 MYL3P08590 195 aa18.53■□□□□ 0.56
IRF3-210ENST00000595240 FPGSQ05932 587 aa18.53■□□□□ 0.56
IRF3-210ENST00000595240 ARHGAP1Q07960 439 aa18.53■□□□□ 0.56
IRF3-210ENST00000595240 LY6KQ17RY6 165 aa18.53■□□□□ 0.56
IRF3-210ENST00000595240 VSIG10LQ86VR7 867 aa18.53■□□□□ 0.56
IRF3-210ENST00000595240 FANCBQ8NB91 859 aa18.53■□□□□ 0.56
IRF3-210ENST00000595240 RGS20O76081 388 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 GH1P01241 217 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 PGM5Q15124 567 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 MFSD5Q6N075 450 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 TMTC3Q6ZXV5 915 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 FCHSD1Q86WN1 690 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 MICU3Q86XE3 530 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 CMTR1Q8N1G2 835 aaKnown RBP18.52■□□□□ 0.56
IRF3-210ENST00000595240 IL31RAQ8NI17 732 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms