RNA–Protein interactions for RNA: ENST00000594656.1

PPFIA4-207, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-207ENST00000594656 TSPY2A6NKD2 308 aa15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 NKRFO15226 690 aaKnown RBP eCLIP15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 BAIAP3O94812 1187 aa15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 FGRP09769 529 aa15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 BFSP2Q13515 415 aa15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 TCTN1Q2MV58 587 aa15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 C20orf194Q5TEA3 1177 aa15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 SLC30A10Q6XR72 485 aa15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
PPFIA4-207ENST00000594656 TET1Q8NFU7 2136 aa15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 ARIH2O95376 493 aa15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 CALML3P27482 149 aa15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 WDR5P61964 334 aaKnown RBP15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 BRDTQ58F21 947 aaPredicted RBP15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 SYDE2Q5VT97 1194 aa15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 RNF207Q6ZRF8 634 aa15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 DHX38Q92620 1227 aaKnown RBP15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 SUGCTQ9HAC7 445 aa15.17■□□□□ 0.02
PPFIA4-207ENST00000594656 SCN10AQ9Y5Y9 1956 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 BRWD1Q9NSI6 2320 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 LCTP09848 1927 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 RANBP6O60518 1105 aaKnown RBP15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 RPS6P62753 249 aaKnown RBP15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 DEFB103AP81534 67 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 PDE4DQ08499 809 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 PPP2R5BQ15173 497 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 PTGISQ16647 500 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 CCDC96Q2M329 555 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 GDF6Q6KF10 455 aaPredicted RBP15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 CCDC62Q6P9F0 684 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 PI4K2BQ8TCG2 481 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 KAT2BQ92831 832 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 GPATCH3Q96I76 525 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 TMEM47Q9BQJ4 181 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 GPCPD1Q9NPB8 672 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 ANAPC4Q9UJX5 808 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 MUC6Q6W4X9 2439 aa15.16■□□□□ 0.02
PPFIA4-207ENST00000594656 ORC4O43929 436 aa15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 NBNO60934 754 aa15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 CXCL10P02778 98 aa15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 KCNJ6P48051 423 aa15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 ERVK-21P61565 698 aa15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 LRRFIP1Q32MZ4 808 aaKnown RBP15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 VPS53Q5VIR6 699 aa15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 AFAP1L1Q8TED9 768 aa15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 GDPD5Q8WTR4 605 aa15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 FRMPD2Q68DX3 1309 aaPredicted RBP15.15■□□□□ 0.02
PPFIA4-207ENST00000594656 SELPP16109 830 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 CHMP4BP1P59074 171 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 SESTD1Q86VW0 696 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 FAM178BQ8IXR5 827 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 DNERQ8NFT8 737 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 CAGE1Q8TC20 777 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 AFG1LQ8WV93 481 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 TBC1D5Q92609 795 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 RAD9AQ99638 391 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 NOD1Q9Y239 953 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 RAD50Q92878 1312 aa15.14■□□□□ 0.01
PPFIA4-207ENST00000594656 LINC01553A4QN01 128 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 GJB5O95377 273 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 TOP1P11387 765 aaKnown RBP15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 RBL2Q08999 1139 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 ALX1Q15699 326 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 LEXMQ3ZCV2 418 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 CNKSR3Q6P9H4 555 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 TRAF7Q6Q0C0 670 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 MIER1Q8N108 512 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 GJD3Q8N144 294 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 RGS22Q8NE09 1264 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 ZBED2Q9BTP6 218 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 FSD1Q9BTV5 496 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 UBE2ZQ9H832 354 aaPredicted RBP15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 TCP11L1Q9NUJ3 509 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 MTUS1Q9ULD2 1270 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 TTC41PQ6P2S7 1318 aa15.13■□□□□ 0.01
PPFIA4-207ENST00000594656 MMP3P08254 477 aa15.12■□□□□ 0.01
PPFIA4-207ENST00000594656 PDHBP11177 359 aa15.12■□□□□ 0.01
PPFIA4-207ENST00000594656 CKBP12277 381 aa15.12■□□□□ 0.01
PPFIA4-207ENST00000594656 ARHGAP1Q07960 439 aa15.12■□□□□ 0.01
PPFIA4-207ENST00000594656 LY6KQ17RY6 165 aa15.12■□□□□ 0.01
PPFIA4-207ENST00000594656 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
PPFIA4-207ENST00000594656 ALYREFQ86V81 257 aaKnown RBP15.12■□□□□ 0.01
PPFIA4-207ENST00000594656 TGS1Q96RS0 853 aaKnown RBP15.12■□□□□ 0.01
PPFIA4-207ENST00000594656 ABHD14A-ACY1A0A1B0GW23 586 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 SNHG28P0DPA3 235 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 MBTPS1Q14703 1052 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 TRIM71Q2Q1W2 868 aaKnown RBP15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 CCDC155Q8N6L0 562 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 WNT8BQ93098 351 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 TAAR1Q96RJ0 339 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 MPHOSPH6Q99547 160 aaKnown RBP15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 HDAC6Q9UBN7 1215 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 GTF2IRD1Q9UHL9 959 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 PNMA2Q9UL42 364 aa15.11■□□□□ 0.01
PPFIA4-207ENST00000594656 WDR19Q8NEZ3 1342 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms