RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 LACTBP83111 547 aaPredicted RBP12.38□□□□□ -0.43
USE1-204ENST00000594399 SP3Q02447 781 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 GRB14Q14449 540 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 EARS2Q5JPH6 523 aaKnown RBP12.38□□□□□ -0.43
USE1-204ENST00000594399 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
USE1-204ENST00000594399 ATP6V1DQ9Y5K8 247 aa12.38□□□□□ -0.43
USE1-204ENST00000594399 RPTORQ8N122 1335 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 LRRC37A2A6NM11 1700 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 ZSWIM8A7E2V4 1837 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 DNAJC25-GNG10A0A024R161 153 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 SLC15A5A6NIM6 579 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 TNPO2O14787 897 aaKnown RBP12.37□□□□□ -0.43
USE1-204ENST00000594399 ADORA2AP29274 412 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 SREBF1P36956 1147 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 TRAPPC10P48553 1259 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 KIF22Q14807 665 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 INF2Q27J81 1249 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 RILPL1Q5EBL4 403 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 NEK8Q86SG6 692 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 DNERQ8NFT8 737 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 TBCKQ8TEA7 893 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 SOCS4Q8WXH5 440 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 RMDN3Q96TC7 470 aa12.37□□□□□ -0.43
USE1-204ENST00000594399 ADD3Q9UEY8 706 aaKnown RBP12.37□□□□□ -0.43
USE1-204ENST00000594399 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
USE1-204ENST00000594399 PGK2P07205 417 aa12.36□□□□□ -0.43
USE1-204ENST00000594399 EIF2AK2P19525 551 aaKnown RBP12.36□□□□□ -0.43
USE1-204ENST00000594399 ARHGAP4P98171 946 aa12.36□□□□□ -0.43
USE1-204ENST00000594399 CNTN2Q02246 1040 aa12.36□□□□□ -0.43
USE1-204ENST00000594399 ARHGEF16Q5VV41 709 aa12.36□□□□□ -0.43
USE1-204ENST00000594399 FAM133AQ8N9E0 248 aa12.36□□□□□ -0.43
USE1-204ENST00000594399 NSUN6Q8TEA1 469 aaKnown RBP12.36□□□□□ -0.43
USE1-204ENST00000594399 PURBQ96QR8 312 aaKnown RBP12.36□□□□□ -0.43
USE1-204ENST00000594399 TAAR1Q96RJ0 339 aa12.36□□□□□ -0.43
USE1-204ENST00000594399 PXMP2Q9NR77 195 aa12.36□□□□□ -0.43
USE1-204ENST00000594399 PLXNA1Q9UIW2 1896 aa12.36□□□□□ -0.43
USE1-204ENST00000594399 MYH7BA7E2Y1 1941 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 CTGFP29279 349 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 RGS2P41220 211 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 PSMC4P43686 418 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 ALDH5A1P51649 535 aaPredicted RBP12.35□□□□□ -0.43
USE1-204ENST00000594399 UBXN2AP68543 259 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 MAP2K5Q13163 448 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 PGM5Q15124 567 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 ZNF792Q3KQV3 632 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 FOXD4L6Q3SYB3 417 aaPredicted RBP12.35□□□□□ -0.43
USE1-204ENST00000594399 MORN1Q5T089 497 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 FAM173BQ6P4H8 233 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 FOXD4L3Q6VB84 417 aaPredicted RBP12.35□□□□□ -0.43
USE1-204ENST00000594399 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 ERO1AQ96HE7 468 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 TRIM47Q96LD4 638 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 ZNF396Q96N95 335 aaPredicted RBP12.35□□□□□ -0.43
USE1-204ENST00000594399 MPHOSPH6Q99547 160 aaKnown RBP12.35□□□□□ -0.43
USE1-204ENST00000594399 APBA2Q99767 749 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 PDCD2LQ9BRP1 358 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 ARHGAP39Q9C0H5 1083 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 SLC5A4Q9NY91 659 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 ASTN1O14525 1302 aa12.35□□□□□ -0.43
USE1-204ENST00000594399 LOC102724159A0A0B4J2E5 919 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 B4DLN1 442 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 COBLO75128 1261 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 GCFC2P16383 781 aaKnown RBP12.34□□□□□ -0.43
USE1-204ENST00000594399 ATP2B1P20020 1258 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 CCND2P30279 289 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 ORC2Q13416 577 aaPredicted RBP12.34□□□□□ -0.43
USE1-204ENST00000594399 ARHGEF6Q15052 776 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 PWP2Q15269 919 aaKnown RBP12.34□□□□□ -0.43
USE1-204ENST00000594399 LETM2Q2VYF4 491 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 TTC38Q5R3I4 469 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 XRRA1Q6P2D8 792 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 DPP9Q86TI2 863 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 IL31RAQ8NI17 732 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 CRYGNQ8WXF5 182 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 FGD4Q96M96 766 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 IWS1Q96ST2 819 aa12.34□□□□□ -0.43
USE1-204ENST00000594399 NAP1L4Q99733 375 aaKnown RBP12.34□□□□□ -0.43
USE1-204ENST00000594399 CCNT1O60563 726 aaKnown RBP12.33□□□□□ -0.44
USE1-204ENST00000594399 TDP2O95551 362 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 NR3C2P08235 984 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 CYP3A4P08684 503 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 HOXC6P09630 235 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 EDNRBP24530 442 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
USE1-204ENST00000594399 USP11P51784 963 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 KRT85P78386 507 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
USE1-204ENST00000594399 NBR1Q14596 966 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 ATL3Q6DD88 541 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 FBXO46Q6PJ61 603 aaPredicted RBP12.33□□□□□ -0.44
USE1-204ENST00000594399 MOXD1Q6UVY6 613 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
USE1-204ENST00000594399 USP6NLQ92738 828 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 TNPO1Q92973 898 aaKnown RBP12.33□□□□□ -0.44
USE1-204ENST00000594399 MAML3Q96JK9 1138 aa12.33□□□□□ -0.44
USE1-204ENST00000594399 DIS3Q9Y2L1 958 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms