RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 RNPC3Q96LT9 517 aaKnown RBP15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 RMDN3Q96TC7 470 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 ESYT1Q9BSJ8 1104 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 LSG1Q9H089 658 aaKnown RBP15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 POLR3EQ9NVU0 708 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 MTMR10Q9NXD2 777 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 PCDHA1Q9Y5I3 950 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 LAMA2P24043 3122 aaKnown RBP15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 OPLAHO14841 1288 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 ARIH2O95376 493 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 EIF2AK2P19525 551 aaKnown RBP15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 TTLL4Q14679 1199 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 BRDTQ58F21 947 aaPredicted RBP15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 ARHGEF16Q5VV41 709 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 MFSD5Q6N075 450 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 SEPT14Q6ZU15 432 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 PIGSQ96S52 555 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 IWS1Q96ST2 819 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 TRPV6Q9H1D0 765 aa15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 GPHNQ9NQX3 736 aaPredicted RBP15.21■□□□□ 0.03
PRKCSH-218ENST00000593053 SLC27A2O14975 620 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 B4GALT4O60513 344 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 CSF2RAP15509 400 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 CYP2C18P33260 490 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 HSD17B4P51659 736 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 PURAQ00577 322 aaKnown RBP15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 STXBP2Q15833 593 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 BMP2KLQ5H9B9 411 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 FAM109BQ6ICB4 259 aaPredicted RBP15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 TMEM199Q8N511 208 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 FAM161BQ96MY7 647 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 MTG1Q9BT17 334 aaPredicted RBP15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 SEZ6LQ9BYH1 1024 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 ANO2Q9NQ90 1003 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 PXMP2Q9NR77 195 aa15.2■□□□□ 0.02
PRKCSH-218ENST00000593053 A6NJR5 290 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 PRC1O43663 620 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 CYTH3O43739 400 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 HOXA13P31271 388 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 GHRHRQ02643 423 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 PPIGQ13427 754 aaKnown RBP eCLIP15.19■□□□□ 0.023e-8■□□□□ 8.3
PRKCSH-218ENST00000593053 LY6KQ17RY6 165 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 CCDC62Q6P9F0 684 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 CASC1Q6TDU7 716 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 PIBF1Q8WXW3 757 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 MYL10Q9BUA6 226 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 HIPK3Q9H422 1215 aa15.19■□□□□ 0.02
PRKCSH-218ENST00000593053 UMODL1Q5DID0 1318 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 PNMA6FA0A0J9YX94 578 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 EIF3JO75822 258 aaKnown RBP15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 NR3C2P08235 984 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 MCM5P33992 734 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 SMAD3P84022 425 aaKnown RBP15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 TRAF1Q13077 416 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 COL9A3Q14050 684 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 ZNF697Q5TEC3 545 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 NFXL1Q6ZNB6 911 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 C16orf59Q7L2K0 433 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 ZNF654Q8IZM8 581 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 PPP1R13LQ8WUF5 828 aa15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 NOC4LQ9BVI4 516 aaKnown RBP15.18■□□□□ 0.02
PRKCSH-218ENST00000593053 GCOM1H8Y6P7 765 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 SH2B2O14492 632 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 KPNA6O60684 536 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 DDAH1O94760 285 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 GH1P01241 217 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 POLR2MP0CAP2 368 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 ACRP10323 421 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 MYCLP12524 364 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 CCL23P55773 120 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 NBPF20Q3BBV1 942 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 FAM47CQ5HY64 1035 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 TMEM240Q5SV17 173 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 AFG1LQ8WV93 481 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 PDCD2LQ9BRP1 358 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 MTA3Q9BTC8 594 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 TRMT13Q9NUP7 481 aaKnown RBP15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 MAP3K20Q9NYL2 800 aaKnown RBP15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 STXBP5LQ9Y2K9 1186 aa15.17■□□□□ 0.02
PRKCSH-218ENST00000593053 CCDC69A6NI79 296 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 CYP2C9P11712 490 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 KIF5BP33176 963 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 CHMP4BP1P59074 171 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 ARHGAP1Q07960 439 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 ZNF365Q70YC5 407 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 FCHSD1Q86WN1 690 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 SAMD3Q8N6K7 520 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 IL31RAQ8NI17 732 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 TMEM87BQ96K49 555 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 GUCD1Q96NT3 240 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 MAP3K14Q99558 947 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 DDX41Q9UJV9 622 aaKnown RBP15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 MRVI1Q9Y6F6 885 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms