RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NSMFQ6X4W1 530 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 INTS4Q96HW7 963 aaKnown RBP11.09□□□□□ -0.63
DDX39A-220ENST00000593008 ZFP91Q96JP5 570 aaPredicted RBP11.09□□□□□ -0.63
DDX39A-220ENST00000593008 ACAD9Q9H845 621 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 A1CFQ9NQ94 594 aaKnown RBP11.09□□□□□ -0.63
DDX39A-220ENST00000593008 DDX20Q9UHI6 824 aaKnown RBP11.09□□□□□ -0.63
DDX39A-220ENST00000593008 OGDHLQ9ULD0 1010 aa11.09□□□□□ -0.63
DDX39A-220ENST00000593008 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 DNAJC25-GNG10A0A024R161 153 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 VPS37CA5D8V6 355 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-220ENST00000593008 WNT7AO00755 349 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-220ENST00000593008 SYT1P21579 422 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 DDIT3P35638 169 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-220ENST00000593008 HMGN5P82970 282 aaKnown RBP11.08□□□□□ -0.64
DDX39A-220ENST00000593008 CNTN2Q02246 1040 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 FERMT3Q86UX7 667 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 C8orf76Q96K31 380 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 FGD4Q96M96 766 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 TINF2Q9BSI4 451 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 PHF20Q9BVI0 1012 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 FBXO40Q9UH90 709 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 MTMR6Q9Y217 621 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-220ENST00000593008 ABCB11O95342 1321 aa11.08□□□□□ -0.64
DDX39A-220ENST00000593008 SMCO2A6NFE2 343 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 MEIS2O14770 477 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 CFBP00751 764 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 CALML3P27482 149 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 ADCY7P51828 1080 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 NLRP5P59047 1200 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
DDX39A-220ENST00000593008 PRPF38BQ5VTL8 546 aaKnown RBP11.07□□□□□ -0.64
DDX39A-220ENST00000593008 FAM173BQ6P4H8 233 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 NECAB2Q7Z6G3 386 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 IL31RAQ8NI17 732 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
DDX39A-220ENST00000593008 LENG1Q96BZ8 264 aaPredicted RBP11.07□□□□□ -0.64
DDX39A-220ENST00000593008 IPO9Q96P70 1041 aaKnown RBP11.07□□□□□ -0.64
DDX39A-220ENST00000593008 DIS3Q9Y2L1 958 aaKnown RBP11.07□□□□□ -0.64
DDX39A-220ENST00000593008 ZDHHC9Q9Y397 364 aa11.07□□□□□ -0.64
DDX39A-220ENST00000593008 LRRC37A2A6NM11 1700 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 BTBD18B2RXH4 712 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 SEPT4O43236 478 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-220ENST00000593008 MMP1P03956 469 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 RPS6P62753 249 aaKnown RBP11.06□□□□□ -0.64
DDX39A-220ENST00000593008 NBR1Q14596 966 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 TKFCQ3LXA3 575 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 GJC2Q5T442 439 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-220ENST00000593008 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
DDX39A-220ENST00000593008 PPP1R18Q6NYC8 613 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 DIS3L2Q8IYB7 885 aaKnown RBP11.06□□□□□ -0.64
DDX39A-220ENST00000593008 ANKLE1Q8NAG6 615 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 FBXO18Q8NFZ0 1043 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 TNFRSF25Q93038 417 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 HTATIP2Q9BUP3 242 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 ZMYND12Q9H0C1 365 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 C11orf49Q9H6J7 331 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 PSTPIP2Q9H939 334 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 RIC8AQ9NPQ8 531 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 CYP39A1Q9NYL5 469 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 ZHX1Q9UKY1 873 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-220ENST00000593008 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 PCDHA4Q9UN74 947 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 CNPY2Q9Y2B0 182 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
DDX39A-220ENST00000593008 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 H0YGN5 161 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 M0R2N6 131 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 EDIL3O43854 480 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 MSCO60682 206 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 ZNF865P0CJ78 1059 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-220ENST00000593008 CLK2P49760 499 aaKnown RBP11.05□□□□□ -0.64
DDX39A-220ENST00000593008 HSD17B4P51659 736 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 RESTQ13127 1097 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 FOXD4L6Q3SYB3 417 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-220ENST00000593008 FOXD4L3Q6VB84 417 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-220ENST00000593008 RNF207Q6ZRF8 634 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDX39A-220ENST00000593008 FAM133AQ8N9E0 248 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 CCDC148Q8NFR7 591 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 WASF1Q92558 559 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 TAAR1Q96RJ0 339 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 UIMC1Q96RL1 719 aa11.05□□□□□ -0.64
DDX39A-220ENST00000593008 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
DDX39A-220ENST00000593008 MRPL11Q9Y3B7 192 aaKnown RBP11.05□□□□□ -0.64
DDX39A-220ENST00000593008 ESYT2A0FGR8 921 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 H3BQV1 296 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 hCG_1984214I3L0E3 225 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 STX6O43752 255 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 EVI5O60447 810 aa11.04□□□□□ -0.64
DDX39A-220ENST00000593008 EIF2AK2P19525 551 aaKnown RBP11.04□□□□□ -0.64
DDX39A-220ENST00000593008 PTGS1P23219 599 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms