RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 CYP27B1O15528 508 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 GUCY2FP51841 1108 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 FOXP4Q8IVH2 680 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-228ENST00000592705 CCDC105Q8IYK2 499 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
DNMT1-228ENST00000592705 FYB2Q5VWT5 728 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 RESP18Q5W5W9 173 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 DEPTORQ8TB45 409 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 WRNIP1Q96S55 665 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 BUB1O43683 1085 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 CLCN6P51797 869 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 CEP85LQ5SZL2 805 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 MIER3Q7Z3K6 550 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 MAK16Q9BXY0 300 aaKnown RBP13.95□□□□□ -0.18
DNMT1-228ENST00000592705 PSTPIP2Q9H939 334 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 CDC42BPGQ6DT37 1551 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 A0A1B0GUA9 196 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 KIAA1841Q6NSI8 718 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 MICAL1Q8TDZ2 1067 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 RPS6KC1Q96S38 1066 aa13.95□□□□□ -0.18
DNMT1-228ENST00000592705 JPH2Q9BR39 696 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-228ENST00000592705 SAMSN1Q9NSI8 373 aaKnown RBP13.95□□□□□ -0.18
DNMT1-228ENST00000592705 KRIT1O00522 736 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 NDC80O14777 642 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 P2RX5Q93086 422 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 METTL14Q9HCE5 456 aaKnown RBP13.94□□□□□ -0.18
DNMT1-228ENST00000592705 ZSWIM5Q9P217 1185 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 WDR19Q8NEZ3 1342 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 C1orf167Q5SNV9 1468 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 POLR2FP61218 127 aaKnown RBP13.94□□□□□ -0.18
DNMT1-228ENST00000592705 FAM26FQ5R3K3 315 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 SUSD4Q5VX71 490 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 GRAMD1CQ8IYS0 662 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 LRRC47Q8N1G4 583 aaKnown RBP13.94□□□□□ -0.18
DNMT1-228ENST00000592705 BSDC1Q9NW68 430 aaPredicted RBP13.94□□□□□ -0.18
DNMT1-228ENST00000592705 ZNRF3Q9ULT6 936 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 AGTPBP1Q9UPW5 1226 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 IGKV5-2P06315 115 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 YARSP54577 528 aaKnown RBP13.94□□□□□ -0.18
DNMT1-228ENST00000592705 NR5A1Q13285 461 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 DDX25Q9UHL0 483 aaKnown RBP13.94□□□□□ -0.18
DNMT1-228ENST00000592705 PCDHB13Q9Y5F0 798 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 TULP4Q9NRJ4 1543 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 CHRNA5P30532 468 aa13.94□□□□□ -0.18
DNMT1-228ENST00000592705 TAF1CQ15572 869 aaPredicted RBP13.94□□□□□ -0.18
DNMT1-228ENST00000592705 FEZ2Q9UHY8 353 aaPredicted RBP13.94□□□□□ -0.18
DNMT1-228ENST00000592705 STK25O00506 426 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 HUNKP57058 714 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 ODR4Q5SWX8 454 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 PPFIBP2Q8ND30 876 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 PARD6BQ9BYG5 372 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 SOWAHDA6NJG2 315 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 ZBBXA8MT70 800 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
DNMT1-228ENST00000592705 PI16Q6UXB8 463 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-228ENST00000592705 RPAP1Q9BWH6 1393 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-228ENST00000592705 GOLGA8HP0CJ92 632 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 ATP1A3P13637 1013 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 FBXO38Q6PIJ6 1188 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 PAGE5Q96GU1 130 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 SUGCTQ9HAC7 445 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■■■■□ 19.7
DNMT1-228ENST00000592705 IQSEC2Q5JU85 1478 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 ZSCAN20P17040 1043 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-228ENST00000592705 ADAM9Q13443 819 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 NFIXQ14938 502 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 GPATCH4Q5T3I0 446 aaKnown RBP13.93□□□□□ -0.18
DNMT1-228ENST00000592705 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 THAP9Q9H5L6 903 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 FAM204AQ9H8W3 233 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 TXNDC16Q9P2K2 825 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 PCDHB6Q9Y5E3 794 aa13.93□□□□□ -0.18
DNMT1-228ENST00000592705 ARHGAP44Q17R89 818 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 TSGA10IPQ3SY00 556 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 CDHR1Q96JP9 859 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 OSBPL5Q9H0X9 879 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 GOLPH3LQ9H4A5 285 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 PPANQ9NQ55 473 aaKnown RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 BZW2Q9Y6E2 419 aaKnown RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 RGS16O15492 202 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 GDF11O95390 407 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 HOXA7P31268 230 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 IGBP1P78318 339 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 RNASELQ05823 741 aaKnown RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 FASTKD5Q7L8L6 764 aaKnown RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 CCDC170Q8IYT3 715 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 FMR1NBQ8N0W7 255 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 FBXO40Q9UH90 709 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 ENC1O14682 589 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 H2AFZP0C0S5 128 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 SLFNL1Q499Z3 407 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 H2AFVQ71UI9 128 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 TPH2Q8IWU9 490 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms