RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 SCRN1Q12765 414 aa13.69□□□□□ -0.22
H3F3B-212ENST00000592643 STK3Q13188 491 aa13.69□□□□□ -0.22
H3F3B-212ENST00000592643 PPP2R5BQ15173 497 aa13.69□□□□□ -0.22
H3F3B-212ENST00000592643 GJC2Q5T442 439 aaPredicted RBP13.69□□□□□ -0.22
H3F3B-212ENST00000592643 CCSAPQ6IQ19 270 aaPredicted RBP13.69□□□□□ -0.22
H3F3B-212ENST00000592643 PAWRQ96IZ0 340 aaKnown RBP13.69□□□□□ -0.22
H3F3B-212ENST00000592643 RMDN3Q96TC7 470 aa13.69□□□□□ -0.22
H3F3B-212ENST00000592643 C22orf23Q9BZE7 217 aa13.69□□□□□ -0.22
H3F3B-212ENST00000592643 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
H3F3B-212ENST00000592643 GNEQ9Y223 722 aaKnown RBP13.69□□□□□ -0.22
H3F3B-212ENST00000592643 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
H3F3B-212ENST00000592643 MCM3APO60318 1980 aa13.69□□□□□ -0.22
H3F3B-212ENST00000592643 LOC102724159A0A0B4J2E5 919 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 GCOM1H8Y6P7 765 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-212ENST00000592643 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 PRPF3O43395 683 aaKnown RBP13.68□□□□□ -0.22
H3F3B-212ENST00000592643 PFKFB2O60825 505 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 FARP2O94887 1054 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-212ENST00000592643 ARIH2O95376 493 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 PGK1P00558 417 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 POLR2MP0CAP2 368 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 AKR1A1P14550 325 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 EIF2AK2P19525 551 aaKnown RBP13.68□□□□□ -0.22
H3F3B-212ENST00000592643 NEK4P51957 841 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 PWP2Q15269 919 aaKnown RBP13.68□□□□□ -0.22
H3F3B-212ENST00000592643 UBE2SQ16763 222 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 ME3Q16798 604 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-212ENST00000592643 HEATR3Q7Z4Q2 680 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 ZFP91Q96JP5 570 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-212ENST00000592643 PDCD2LQ9BRP1 358 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
H3F3B-212ENST00000592643 ADD3Q9UEY8 706 aaKnown RBP13.68□□□□□ -0.22
H3F3B-212ENST00000592643 SYNRGQ9UMZ2 1314 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 MSCO60682 206 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 NKX3-2P78367 333 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 MRPS9P82933 396 aaKnown RBP13.67□□□□□ -0.22
H3F3B-212ENST00000592643 LRRC41Q15345 812 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 NECAB1Q8N987 351 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 ANKLE1Q8NAG6 615 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 KLHDC9Q8NEP7 349 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
H3F3B-212ENST00000592643 BACH2Q9BYV9 841 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 UPF3AQ9H1J1 476 aaKnown RBP13.67□□□□□ -0.22
H3F3B-212ENST00000592643 VTA1Q9NP79 307 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
H3F3B-212ENST00000592643 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
H3F3B-212ENST00000592643 FAM184BQ9ULE4 1060 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 FRMPD3Q5JV73 1810 aa13.67□□□□□ -0.22
H3F3B-212ENST00000592643 CCDC196A0A1B0GTZ2 297 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 DUSP11O75319 330 aaKnown RBP13.66□□□□□ -0.22
H3F3B-212ENST00000592643 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
H3F3B-212ENST00000592643 NR3C2P08235 984 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 SCG2P13521 617 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 MLLT1Q03111 559 aaPredicted RBP13.66□□□□□ -0.22
H3F3B-212ENST00000592643 PGM5Q15124 567 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 CCDC62Q6P9F0 684 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
H3F3B-212ENST00000592643 VSIG10LQ86VR7 867 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 SAMD3Q8N6K7 520 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 AIFM3Q96NN9 605 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 PSTPIP2Q9H939 334 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 XPNPEP3Q9NQH7 507 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 PCDH10Q9P2E7 1040 aa13.66□□□□□ -0.22
H3F3B-212ENST00000592643 MYH6P13533 1939 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 DNM1LO00429 736 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 EDIL3O43854 480 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 EIF5BO60841 1220 aaKnown RBP13.65□□□□□ -0.22
H3F3B-212ENST00000592643 RARBP10826 455 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 FDPSP14324 419 aaKnown RBP13.65□□□□□ -0.22
H3F3B-212ENST00000592643 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
H3F3B-212ENST00000592643 GJA9P57773 515 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 TNFAIP2Q03169 654 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 TRAF1Q13077 416 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 SEMA3FQ13275 785 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 NPY5RQ15761 445 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 COPS5Q92905 334 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 IWS1Q96ST2 819 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 SLC26A6Q9BXS9 759 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 RNF26Q9BY78 433 aaPredicted RBP13.65□□□□□ -0.22
H3F3B-212ENST00000592643 BCAS3Q9H6U6 928 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
H3F3B-212ENST00000592643 PDE4DIPQ5VU43 2346 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 CAPN2P17655 700 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 PDE4DQ08499 809 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 DUSP28Q4G0W2 176 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 PPP1R18Q6NYC8 613 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 PGBD1Q96JS3 809 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 WDR11Q9BZH6 1224 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 RIC8AQ9NPQ8 531 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 GJB4Q9NTQ9 266 aa13.64□□□□□ -0.23
H3F3B-212ENST00000592643 CEP290O15078 2479 aa13.63□□□□□ -0.23
H3F3B-212ENST00000592643 SMCO2A6NFE2 343 aa13.63□□□□□ -0.23
H3F3B-212ENST00000592643 EIF3JO75822 258 aaKnown RBP13.63□□□□□ -0.23
H3F3B-212ENST00000592643 CST5P28325 142 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms