RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 AP5S1Q9NUS5 200 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 DUSP13Q9UII6 198 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 CBX4O00257 560 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 CKMP06732 381 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 H2AFB1P0C5Y9 115 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 H2AFB2P0C5Z0 115 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 LCP1P13796 627 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 STAT4Q14765 748 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 IFI16Q16666 785 aaKnown RBP8.57□□□□□ -1.04
VMP1-215ENST00000592619 CYP2R1Q6VVX0 501 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 ZC3H7AQ8IWR0 971 aaKnown RBP8.57□□□□□ -1.04
VMP1-215ENST00000592619 NETO1Q8TDF5 533 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 JDP2Q8WYK2 163 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 CELF4Q9BZC1 486 aaKnown RBP8.57□□□□□ -1.04
VMP1-215ENST00000592619 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 G3BP2Q9UN86 482 aaKnown RBP8.57□□□□□ -1.04
VMP1-215ENST00000592619 ZNF281Q9Y2X9 895 aa8.57□□□□□ -1.04
VMP1-215ENST00000592619 TMEM265A0A087WTH1 108 aa8.56□□□□□ -1.04
VMP1-215ENST00000592619 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
VMP1-215ENST00000592619 TBC1D8O95759 1140 aa8.56□□□□□ -1.04
VMP1-215ENST00000592619 F2P00734 622 aa8.56□□□□□ -1.04
VMP1-215ENST00000592619 RBM10P98175 930 aaKnown RBP8.56□□□□□ -1.04
VMP1-215ENST00000592619 FAM50AQ14320 339 aaKnown RBP8.56□□□□□ -1.04
VMP1-215ENST00000592619 INF2Q27J81 1249 aa8.56□□□□□ -1.04
VMP1-215ENST00000592619 NOL8Q76FK4 1167 aaKnown RBP8.56□□□□□ -1.04
VMP1-215ENST00000592619 IGSF22Q8N9C0 903 aa8.56□□□□□ -1.04
VMP1-215ENST00000592619 USP7Q93009 1102 aa8.56□□□□□ -1.04
VMP1-215ENST00000592619 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.56□□□□□ -1.04
VMP1-215ENST00000592619 SLC5A4Q9NY91 659 aa8.56□□□□□ -1.04
VMP1-215ENST00000592619 THRAP3Q9Y2W1 955 aaKnown RBP8.56□□□□□ -1.04
VMP1-215ENST00000592619 PITPNM2Q9BZ72 1349 aa8.55□□□□□ -1.04
VMP1-215ENST00000592619 TMEM82A0PJX8 343 aa8.55□□□□□ -1.04
VMP1-215ENST00000592619 SPATS2Q86XZ4 545 aaKnown RBP8.55□□□□□ -1.04
VMP1-215ENST00000592619 PI4K2BQ8TCG2 481 aa8.55□□□□□ -1.04
VMP1-215ENST00000592619 CDADC1Q9BWV3 514 aa8.55□□□□□ -1.04
VMP1-215ENST00000592619 PUS7LQ9H0K6 701 aaKnown RBP8.55□□□□□ -1.04
VMP1-215ENST00000592619 LRRC4CQ9HCJ2 640 aa8.55□□□□□ -1.04
VMP1-215ENST00000592619 PCDHA11Q9Y5I1 949 aa8.55□□□□□ -1.04
VMP1-215ENST00000592619 NEMP1O14524 444 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 GSTA4O15217 222 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 ALDH1L1O75891 902 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 ESR1P03372 595 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 FSTP19883 344 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 LTKP29376 864 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 GTF2A2P52657 109 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 DSG1Q02413 1049 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 TEKQ02763 1124 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 MBLAC2Q68D91 279 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 LHFPL2Q6ZUX7 228 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 APOBEC2Q9Y235 224 aaKnown RBP8.54□□□□□ -1.04
VMP1-215ENST00000592619 PCDHA2Q9Y5H9 948 aa8.54□□□□□ -1.04
VMP1-215ENST00000592619 TIMM13Q9Y5L4 95 aaPredicted RBP8.54□□□□□ -1.04
VMP1-215ENST00000592619 M0R2C6 588 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 TRAF5O00463 557 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 CYP26A1O43174 497 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 MYO1BO43795 1136 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 FKTNO75072 461 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 SOD2P04179 222 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 MECP2P51608 486 aaKnown RBP8.53□□□□□ -1.04
VMP1-215ENST00000592619 LSAMPQ13449 338 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 FAM47CQ5HY64 1035 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 CREG2Q8IUH2 290 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 PLD6Q8N2A8 252 aaKnown RBP8.53□□□□□ -1.04
VMP1-215ENST00000592619 SMC1BQ8NDV3 1235 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 PANK1Q8TE04 598 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 FBXW5Q969U6 566 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 ASPSCR1Q9BZE9 553 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 CDIP1Q9H305 208 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 CABP5Q9NP86 173 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 ERVK13-1Q9NX77 482 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 B4GALT6Q9UBX8 382 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 COQ6Q9Y2Z9 468 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 CC2D2AQ9P2K1 1620 aa8.53□□□□□ -1.04
VMP1-215ENST00000592619 C7orf72A4D263 438 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 FAM47E-STBD1D6RA91 191 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 KATNA1O75449 491 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 EPHB1P54762 984 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 EGR3Q06889 387 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 SART3Q15020 963 aaKnown RBP8.52□□□□□ -1.05
VMP1-215ENST00000592619 TMEM177Q53S58 311 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 HSP90AB2PQ58FF8 381 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 C16orf59Q7L2K0 433 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 OVCH1Q7RTY7 1134 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 CPNE8Q86YQ8 564 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 NAT16Q8N8M0 369 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 TMEM52Q8NDY8 209 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 FCRL2Q96LA5 508 aaPredicted RBP8.52□□□□□ -1.05
VMP1-215ENST00000592619 PIM2Q9P1W9 311 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 EID1Q9Y6B2 187 aa8.52□□□□□ -1.05
VMP1-215ENST00000592619 ZNF891A8MT65 544 aaPredicted RBP8.51□□□□□ -1.05
VMP1-215ENST00000592619 GAS7O60861 476 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 SRGAP2CP0DJJ0 459 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 FOSL1P15407 271 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 GRK2P25098 689 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 GRK3P35626 688 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 RPL11P62913 178 aaKnown RBP8.51□□□□□ -1.05
VMP1-215ENST00000592619 LAPTM5Q13571 262 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 MTMR1Q13613 665 aa8.51□□□□□ -1.05
VMP1-215ENST00000592619 TTF1Q15361 905 aaPredicted RBP8.51□□□□□ -1.05
VMP1-215ENST00000592619 SKOR2Q2VWA4 1001 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms