RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 EXOSC10Q01780 885 aaKnown RBP23.42■■□□□ 1.34
CIRBP-239ENST00000592467 ADCK5Q3MIX3 580 aa23.42■■□□□ 1.34
CIRBP-239ENST00000592467 LRIT3Q3SXY7 679 aa23.42■■□□□ 1.34
CIRBP-239ENST00000592467 CCDC62Q6P9F0 684 aa23.42■■□□□ 1.34
CIRBP-239ENST00000592467 NSUN6Q8TEA1 469 aaKnown RBP23.42■■□□□ 1.34
CIRBP-239ENST00000592467 BADQ92934 168 aa23.42■■□□□ 1.34
CIRBP-239ENST00000592467 LRCH3Q96II8 777 aa23.42■■□□□ 1.34
CIRBP-239ENST00000592467 RMDN3Q96TC7 470 aa23.42■■□□□ 1.34
CIRBP-239ENST00000592467 SPZ1Q9BXG8 430 aa23.42■■□□□ 1.34
CIRBP-239ENST00000592467 SMARCA1P28370 1054 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 SGMS1Q86VZ5 419 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 FAM126BQ8IXS8 530 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 TMTC2Q8N394 836 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 SAMD3Q8N6K7 520 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 SCFD2Q8WU76 684 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 COPS5Q92905 334 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 KCNB2Q92953 911 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 IWS1Q96ST2 819 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 MPHOSPH6Q99547 160 aaKnown RBP23.41■■□□□ 1.34
CIRBP-239ENST00000592467 LBHD1Q9BQE6 289 aaPredicted RBP23.41■■□□□ 1.34
CIRBP-239ENST00000592467 PXMP2Q9NR77 195 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 MAP3K20Q9NYL2 800 aaKnown RBP23.41■■□□□ 1.34
CIRBP-239ENST00000592467 TBX21Q9UL17 535 aa23.41■■□□□ 1.34
CIRBP-239ENST00000592467 SCN10AQ9Y5Y9 1956 aa23.4■■□□□ 1.34
CIRBP-239ENST00000592467 PLEKHA8P1O95397 391 aa23.4■■□□□ 1.34
CIRBP-239ENST00000592467 CD4P01730 458 aa23.4■■□□□ 1.34
CIRBP-239ENST00000592467 SRBD1Q8N5C6 995 aaKnown RBP23.4■■□□□ 1.34
CIRBP-239ENST00000592467 B4DLN1 442 aa23.39■■□□□ 1.33
CIRBP-239ENST00000592467 NKRFO15226 690 aaKnown RBP eCLIP23.39■■□□□ 1.33
CIRBP-239ENST00000592467 CABYRO75952 493 aa23.39■■□□□ 1.33
CIRBP-239ENST00000592467 EIF2AK2P19525 551 aaKnown RBP23.39■■□□□ 1.33
CIRBP-239ENST00000592467 RXRAP19793 462 aa23.39■■□□□ 1.33
CIRBP-239ENST00000592467 MRPL12P52815 198 aaKnown RBP23.39■■□□□ 1.33
CIRBP-239ENST00000592467 PPP2R5BQ15173 497 aa23.39■■□□□ 1.33
CIRBP-239ENST00000592467 RNF20Q5VTR2 975 aa23.39■■□□□ 1.33
CIRBP-239ENST00000592467 CTCFLQ8NI51 663 aaPredicted RBP23.39■■□□□ 1.33
CIRBP-239ENST00000592467 NEK1Q96PY6 1258 aa23.39■■□□□ 1.33
CIRBP-239ENST00000592467 MROH7Q68CQ1 1323 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 CCDC69A6NI79 296 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 DCDC2CA8MYV0 355 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 NR3C2P08235 984 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 HOXA13P31271 388 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-239ENST00000592467 KIF5BP33176 963 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 ARHGEF16Q5VV41 709 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 OR6J1Q8NGC5 347 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 PDCD2LQ9BRP1 358 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 TMEM39AQ9NV64 488 aa23.38■■□□□ 1.33
CIRBP-239ENST00000592467 A6NJR5 290 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 ZEB2O60315 1214 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 RGS20O76081 388 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 TXNP10599 105 aaKnown RBP23.37■■□□□ 1.33
CIRBP-239ENST00000592467 EPHB4P54760 987 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 PSMC6P62333 389 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 PURAQ00577 322 aaKnown RBP23.37■■□□□ 1.33
CIRBP-239ENST00000592467 ITGA7Q13683 1181 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 STXBP2Q15833 593 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 C9orf50Q5SZB4 431 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 NFXL1Q6ZNB6 911 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 RAB11FIP4Q86YS3 637 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 CMTR1Q8N1G2 835 aaKnown RBP23.37■■□□□ 1.33
CIRBP-239ENST00000592467 IL31RAQ8NI17 732 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 VTI1AQ96AJ9 217 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 TCEANC2Q96MN5 208 aa23.37■■□□□ 1.33
CIRBP-239ENST00000592467 CALM1P0DP23 149 aa23.36■■□□□ 1.33
CIRBP-239ENST00000592467 CALM2P0DP24 149 aa23.36■■□□□ 1.33
CIRBP-239ENST00000592467 CALM3P0DP25 149 aa23.36■■□□□ 1.33
CIRBP-239ENST00000592467 TRAF1Q13077 416 aa23.36■■□□□ 1.33
CIRBP-239ENST00000592467 TTLL4Q14679 1199 aa23.36■■□□□ 1.33
CIRBP-239ENST00000592467 SHHQ15465 462 aa23.36■■□□□ 1.33
CIRBP-239ENST00000592467 DHX32Q7L7V1 743 aaKnown RBP23.36■■□□□ 1.33
CIRBP-239ENST00000592467 PIBF1Q8WXW3 757 aa23.36■■□□□ 1.33
CIRBP-239ENST00000592467 LZTS2Q9BRK4 669 aa23.36■■□□□ 1.33
CIRBP-239ENST00000592467 FRMPD4Q14CM0 1322 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 EIF3JO75822 258 aaKnown RBP23.35■■□□□ 1.33
CIRBP-239ENST00000592467 TIMP1P01033 207 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 RAG1P15918 1043 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 HSPA4P34932 840 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 GNAQP50148 359 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 CPT1AP50416 773 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 ARHGAP1Q07960 439 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 PGM5Q15124 567 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 LY6KQ17RY6 165 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 SEPT14Q6ZU15 432 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 TMTC3Q6ZXV5 915 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 VSIG10LQ86VR7 867 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 FANCBQ8NB91 859 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 BRPF3Q9ULD4 1205 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 SLC12A7Q9Y666 1083 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 MYH7BA7E2Y1 1941 aa23.35■■□□□ 1.33
CIRBP-239ENST00000592467 GCOM1H8Y6P7 765 aaPredicted RBP23.34■■□□□ 1.33
CIRBP-239ENST00000592467 NEFLP07196 543 aa23.34■■□□□ 1.33
CIRBP-239ENST00000592467 POLR2MP0CAP2 368 aa23.34■■□□□ 1.33
CIRBP-239ENST00000592467 APOA5Q6Q788 366 aa23.34■■□□□ 1.33
CIRBP-239ENST00000592467 RRP36Q96EU6 259 aaKnown RBP23.34■■□□□ 1.33
CIRBP-239ENST00000592467 POLR3EQ9NVU0 708 aa23.34■■□□□ 1.33
CIRBP-239ENST00000592467 DDX41Q9UJV9 622 aaKnown RBP23.34■■□□□ 1.33
CIRBP-239ENST00000592467 KRT32Q14532 448 aa23.33■■□□□ 1.33
CIRBP-239ENST00000592467 SEZ6LQ9BYH1 1024 aa23.33■■□□□ 1.33
CIRBP-239ENST00000592467 SNX14Q9Y5W7 946 aa23.33■■□□□ 1.33
CIRBP-239ENST00000592467 MEIS2O14770 477 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms