RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 ALG1Q9BT22 464 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 SLC26A6Q9BXS9 759 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 TRIM34Q9BYJ4 488 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 ZSCAN16Q9H4T2 348 aaPredicted RBP9.06□□□□□ -0.96
SDF2-210ENST00000592250 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 GINM1Q9NU53 330 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 LMBRD1Q9NUN5 540 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 CLIP2Q9UDT6 1046 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 STX8Q9UNK0 236 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 CSADQ9Y600 493 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 MYH15Q9Y2K3 1946 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 A0A1W2PRG0 241 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 VPS37CA5D8V6 355 aaPredicted RBP9.05□□□□□ -0.96
SDF2-210ENST00000592250 USP17L5A8MUK1 530 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 GDF11O95390 407 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 GH2P01242 217 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 ASNSP08243 561 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 U2AF2P26368 475 aaKnown RBP eCLIP9.05□□□□□ -0.96
SDF2-210ENST00000592250 GRM5P41594 1212 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 GNAQP50148 359 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 PPATQ06203 517 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 ZNF543Q08ER8 600 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 NNTQ13423 1086 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 NPY5RQ15761 445 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 KRT40Q6A162 431 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 USP17L2Q6R6M4 530 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 CTU1Q7Z7A3 348 aaKnown RBP9.05□□□□□ -0.96
SDF2-210ENST00000592250 MTMR8Q96EF0 704 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 WNK4Q96J92 1243 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 C8orf76Q96K31 380 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 LZTS2Q9BRK4 669 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 SPZ1Q9BXG8 430 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 RIOX1Q9H6W3 641 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 RNF186Q9NXI6 227 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.05□□□□□ -0.96
SDF2-210ENST00000592250 GMPR2Q9P2T1 348 aaKnown RBP9.05□□□□□ -0.96
SDF2-210ENST00000592250 ZBTB21Q9ULJ3 1066 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 AFG3L2Q9Y4W6 797 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 PHIPQ8WWQ0 1821 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 ATAD5Q96QE3 1844 aa9.05□□□□□ -0.96
SDF2-210ENST00000592250 KIF28PB7ZC32 967 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 KLRF2D3W0D1 207 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 ADH1CP00326 375 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 GUCY1B3Q02153 619 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 PPIL2Q13356 520 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 PFKFB3Q16875 520 aaPredicted RBP9.04□□□□□ -0.96
SDF2-210ENST00000592250 ASPRV1Q53RT3 343 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 FAM173BQ6P4H8 233 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 FERMT3Q86UX7 667 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 TRIM22Q8IYM9 498 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 LRRC47Q8N1G4 583 aaKnown RBP9.04□□□□□ -0.96
SDF2-210ENST00000592250 GMCL1P1Q8NEA9 526 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 WASF1Q92558 559 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 OCSTAMPQ9BR26 566 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 ARHGAP9Q9BRR9 750 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 ATP13A2Q9NQ11 1180 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 PICK1Q9NRD5 415 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 KCNH4Q9UQ05 1017 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 TMX2Q9Y320 296 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 ZHX2Q9Y6X8 837 aa9.04□□□□□ -0.96
SDF2-210ENST00000592250 H3BQV1 296 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 MPHOSPH10O00566 681 aaKnown RBP9.03□□□□□ -0.96
SDF2-210ENST00000592250 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
SDF2-210ENST00000592250 MMP1P03956 469 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 PARP1P09874 1014 aaKnown RBP9.03□□□□□ -0.96
SDF2-210ENST00000592250 GOLGA8HP0CJ92 632 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 ICA1Q05084 483 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 DNM1Q05193 864 aaKnown RBP9.03□□□□□ -0.96
SDF2-210ENST00000592250 KIAA1755Q5JYT7 1200 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 MCTP1Q6DN14 999 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 CCDC84Q86UT8 332 aaPredicted RBP9.03□□□□□ -0.96
SDF2-210ENST00000592250 FAM177A1Q8N128 213 aaPredicted RBP9.03□□□□□ -0.96
SDF2-210ENST00000592250 CCDC82Q8N4S0 544 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 ZNF280CQ8ND82 737 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 ACER1Q8TDN7 264 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 DCAF4Q8WV16 495 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 TNFRSF25Q93038 417 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 GMCL1Q96IK5 515 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 PHF20Q9BVI0 1012 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 CABP5Q9NP86 173 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 SH3GLB2Q9NR46 395 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 SAGE1Q9NXZ1 904 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 ATP6V1DQ9Y5K8 247 aa9.03□□□□□ -0.96
SDF2-210ENST00000592250 hCG_1642624A0A1W2PR95 340 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 F5H6K3 240 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 M0R2N6 131 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 CXCL11O14625 94 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 NR3C2P08235 984 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 SCG2P13521 617 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 TM4SF4P48230 202 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 KLRC3Q07444 240 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 MOGSQ13724 837 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 GPATCH4Q5T3I0 446 aaKnown RBP9.02□□□□□ -0.97
SDF2-210ENST00000592250 ATL3Q6DD88 541 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 TTBK2Q6IQ55 1244 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 BTNL9Q6UXG8 535 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 BRAPQ7Z569 592 aa9.02□□□□□ -0.97
SDF2-210ENST00000592250 TRMT44Q8IYL2 757 aaKnown RBP9.02□□□□□ -0.97
SDF2-210ENST00000592250 KLF16Q9BXK1 252 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms