RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 USH1GQ495M9 461 aa17.54■□□□□ 0.4
ERCC1-214ENST00000592083 TMEM63BQ5T3F8 832 aa17.54■□□□□ 0.4
ERCC1-214ENST00000592083 SLC30A10Q6XR72 485 aa17.54■□□□□ 0.4
ERCC1-214ENST00000592083 SLC43A3Q8NBI5 491 aa17.54■□□□□ 0.4
ERCC1-214ENST00000592083 VWCEQ96DN2 955 aa17.54■□□□□ 0.4
ERCC1-214ENST00000592083 TSPYL2Q9H2G4 693 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-214ENST00000592083 EPHX3Q9H6B9 360 aa17.54■□□□□ 0.4
ERCC1-214ENST00000592083 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
ERCC1-214ENST00000592083 CALML3P27482 149 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 PSMC6P62333 389 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 ITGA7Q13683 1181 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 SKIV2LQ15477 1246 aaKnown RBP17.53■□□□□ 0.4
ERCC1-214ENST00000592083 IFIT1BQ5T764 474 aaKnown RBP17.53■□□□□ 0.4
ERCC1-214ENST00000592083 PPP2R2DQ66LE6 453 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 FBXO16Q8IX29 292 aaPredicted RBP17.53■□□□□ 0.4
ERCC1-214ENST00000592083 SCLYQ96I15 445 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 NOC4LQ9BVI4 516 aaKnown RBP17.53■□□□□ 0.4
ERCC1-214ENST00000592083 WNT8AQ9H1J5 351 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 MTIF3Q9H2K0 278 aaKnown RBP17.53■□□□□ 0.4
ERCC1-214ENST00000592083 CERS4Q9HA82 394 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 VAT1LQ9HCJ6 419 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 SLC4A7Q9Y6M7 1214 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
ERCC1-214ENST00000592083 XIRP2A4UGR9 3374 aa17.53■□□□□ 0.4
ERCC1-214ENST00000592083 DYNC1LI2O43237 492 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-214ENST00000592083 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
ERCC1-214ENST00000592083 PARP1P09874 1014 aaKnown RBP17.52■□□□□ 0.4
ERCC1-214ENST00000592083 NKX3-2P78367 333 aa17.52■□□□□ 0.4
ERCC1-214ENST00000592083 TRDNQ13061 729 aa17.52■□□□□ 0.4
ERCC1-214ENST00000592083 SEC23AQ15436 765 aa17.52■□□□□ 0.4
ERCC1-214ENST00000592083 CDC37Q16543 378 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-214ENST00000592083 RNF207Q6ZRF8 634 aa17.52■□□□□ 0.4
ERCC1-214ENST00000592083 ADGRF4Q8IZF3 695 aa17.52■□□□□ 0.4
ERCC1-214ENST00000592083 C1QTNF1Q9BXJ1 281 aa17.52■□□□□ 0.4
ERCC1-214ENST00000592083 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 LRRC37A2A6NM11 1700 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 ZBBXA8MT70 800 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 E7EWF7 191 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 B4GALT4O60513 344 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 SMPD1P17405 629 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 ALDH5A1P51649 535 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-214ENST00000592083 SCN5AQ14524 2016 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 ASPRV1Q53RT3 343 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 KRT40Q6A162 431 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 TAPT1Q6NXT6 567 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 STOX1Q6ZVD7 989 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 CHST3Q7LGC8 479 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 STAG2Q8N3U4 1231 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 LRFN3Q9BTN0 628 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 GNEQ9Y223 722 aaKnown RBP17.51■□□□□ 0.39
ERCC1-214ENST00000592083 PCDHA11Q9Y5I1 949 aa17.51■□□□□ 0.39
ERCC1-214ENST00000592083 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
ERCC1-214ENST00000592083 RPS6P62753 249 aaKnown RBP17.5■□□□□ 0.39
ERCC1-214ENST00000592083 FSCN1Q16658 493 aaKnown RBP17.5■□□□□ 0.39
ERCC1-214ENST00000592083 RPUSD2Q8IZ73 545 aaKnown RBP17.5■□□□□ 0.39
ERCC1-214ENST00000592083 TBC1D5Q92609 795 aa17.5■□□□□ 0.39
ERCC1-214ENST00000592083 MAP4K1Q92918 833 aa17.5■□□□□ 0.39
ERCC1-214ENST00000592083 JMJD4Q9H9V9 463 aa17.5■□□□□ 0.39
ERCC1-214ENST00000592083 ADD3Q9UEY8 706 aaKnown RBP17.5■□□□□ 0.39
ERCC1-214ENST00000592083 PNMA2Q9UL42 364 aa17.5■□□□□ 0.39
ERCC1-214ENST00000592083 RBM8AQ9Y5S9 174 aaKnown RBP17.5■□□□□ 0.39
ERCC1-214ENST00000592083 MTCH2Q9Y6C9 303 aa17.5■□□□□ 0.39
ERCC1-214ENST00000592083 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
ERCC1-214ENST00000592083 TTLL4Q14679 1199 aa17.49■□□□□ 0.39
ERCC1-214ENST00000592083 QRICH1Q2TAL8 776 aa17.49■□□□□ 0.39
ERCC1-214ENST00000592083 KIAA1211Q6ZU35 1233 aa17.49■□□□□ 0.39
ERCC1-214ENST00000592083 RALYLQ86SE5 291 aaKnown RBP17.49■□□□□ 0.39
ERCC1-214ENST00000592083 TLK2Q86UE8 772 aa17.49■□□□□ 0.39
ERCC1-214ENST00000592083 MORC4Q8TE76 937 aa17.49■□□□□ 0.39
ERCC1-214ENST00000592083 AP5M1Q9H0R1 490 aa17.49■□□□□ 0.39
ERCC1-214ENST00000592083 EPOPA6NHQ4 379 aa17.48■□□□□ 0.39
ERCC1-214ENST00000592083 KLRF2D3W0D1 207 aa17.48■□□□□ 0.39
ERCC1-214ENST00000592083 CABYRO75952 493 aa17.48■□□□□ 0.39
ERCC1-214ENST00000592083 ATP2A2P16615 1042 aaKnown RBP17.48■□□□□ 0.39
ERCC1-214ENST00000592083 IQSEC1Q6DN90 963 aa17.48■□□□□ 0.39
ERCC1-214ENST00000592083 CENPQQ7L2Z9 268 aaPredicted RBP17.48■□□□□ 0.39
ERCC1-214ENST00000592083 DEFB128Q7Z7B8 93 aa17.48■□□□□ 0.39
ERCC1-214ENST00000592083 NCOA7Q8NI08 942 aa17.48■□□□□ 0.39
ERCC1-214ENST00000592083 VTA1Q9NP79 307 aa17.48■□□□□ 0.39
ERCC1-214ENST00000592083 MYH6P13533 1939 aa17.48■□□□□ 0.39
ERCC1-214ENST00000592083 CA3P07451 260 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 CYP2C9P11712 490 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 ANTXR2P58335 489 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 AAK1Q2M2I8 961 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 TMEM67Q5HYA8 995 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 FBXO11Q86XK2 927 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 PPP1R13LQ8WUF5 828 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.39
ERCC1-214ENST00000592083 ESYT1Q9BSJ8 1104 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 LSG1Q9H089 658 aaKnown RBP17.47■□□□□ 0.39
ERCC1-214ENST00000592083 TRMT13Q9NUP7 481 aaKnown RBP17.47■□□□□ 0.39
ERCC1-214ENST00000592083 MAD2L2Q9UI95 211 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 ABCB11O95342 1321 aa17.47■□□□□ 0.39
ERCC1-214ENST00000592083 ERICH2A1L162 156 aa17.46■□□□□ 0.39
ERCC1-214ENST00000592083 TLL1O43897 1013 aa17.46■□□□□ 0.39
ERCC1-214ENST00000592083 ARHGEF15O94989 841 aa17.46■□□□□ 0.39
ERCC1-214ENST00000592083 PDE4DQ08499 809 aa17.46■□□□□ 0.39
ERCC1-214ENST00000592083 WTAPQ15007 396 aa17.46■□□□□ 0.39
ERCC1-214ENST00000592083 SLC35G1Q2M3R5 365 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms