RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SRRTQ9BXP5 876 aaKnown RBP17.65■□□□□ 0.42
MBD1-227ENST00000592060 COL4A5P29400 1685 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 RRP1BQ14684 758 aaKnown RBP17.64■□□□□ 0.41
MBD1-227ENST00000592060 ZNF507Q8TCN5 953 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 SNX29Q8TEQ0 813 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 NAP1L4Q99733 375 aaKnown RBP17.64■□□□□ 0.41
MBD1-227ENST00000592060 PCDHA1Q9Y5I3 950 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 BICDL2A1A5D9 508 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 F5H6K3 240 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 RNF225M0QZC1 329 aaPredicted RBP17.64■□□□□ 0.41
MBD1-227ENST00000592060 NDUFB10O96000 172 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 EN1Q05925 392 aaPredicted RBP17.64■□□□□ 0.41
MBD1-227ENST00000592060 KLRC3Q07444 240 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 UNC13DQ70J99 1090 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 PDCL2Q8N4E4 241 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 CDK5RAP3Q96JB5 506 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 MBOAT7Q96N66 472 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 MRPL44Q9H9J2 332 aaKnown RBP17.64■□□□□ 0.41
MBD1-227ENST00000592060 ADGRG1Q9Y653 693 aa17.64■□□□□ 0.41
MBD1-227ENST00000592060 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 PVALEFA0A1B0GWK0 134 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 A0A1W2PQC6 194 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L15C9J2P7 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L13C9JLJ4 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L11C9JVI0 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L18D6R9N7 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L22D6RA61 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L17D6RBQ6 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L19D6RCP7 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L20D6RJB6 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 C21orf2O43822 256 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 RAD21O60216 631 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 TPM1P09493 284 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 UBXN1Q04323 297 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L24Q0WX57 530 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 KRT79Q5XKE5 535 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 ANKRD40Q6AI12 368 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 USP17L6PQ6QN14 398 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 KCNK18Q7Z418 384 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 MB21D1Q8N884 522 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 ANO3Q9BYT9 981 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 ABHD10Q9NUJ1 306 aa17.63■□□□□ 0.41
MBD1-227ENST00000592060 GH2P01242 217 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 CCDC175P0C221 793 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 ECM1Q16610 540 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 HYIQ5T013 277 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 CSGALNACT2Q8N6G5 542 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 CRYGNQ8WXF5 182 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 NUP88Q99567 741 aaPredicted RBP17.62■□□□□ 0.41
MBD1-227ENST00000592060 CYP3A7-CYP3A51PA0A087WV96 503 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 MEIS2O14770 477 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 CYP3A7P24462 503 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 ERVK-24P63145 666 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 EHHADHQ08426 723 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 AP3B2Q13367 1082 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 BTNL9Q6UXG8 535 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 HPS3Q969F9 1004 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 P2RX7Q99572 595 aaKnown RBP17.62■□□□□ 0.41
MBD1-227ENST00000592060 KCNMB3Q9NPA1 279 aa17.62■□□□□ 0.41
MBD1-227ENST00000592060 MAGEC2Q9UBF1 373 aaPredicted RBP17.62■□□□□ 0.41
MBD1-227ENST00000592060 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 MMP14P50281 582 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 USP11P51784 963 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 GRIPAP1Q4V328 841 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 RBM26Q5T8P6 1007 aaKnown RBP17.61■□□□□ 0.41
MBD1-227ENST00000592060 SYDE2Q5VT97 1194 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 RSBN1LQ6PCB5 846 aaPredicted RBP17.61■□□□□ 0.41
MBD1-227ENST00000592060 MOXD1Q6UVY6 613 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 CREBRFQ8IUR6 639 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 LRRN4CLQ8ND94 238 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 GJA10Q969M2 543 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 KIFC2Q96AC6 838 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 WDR24Q96S15 920 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 CSRNP1Q96S65 589 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 GMLQ99445 158 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 SEMA6BQ9H3T3 888 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 SYNPO2Q9UMS6 1093 aa17.61■□□□□ 0.41
MBD1-227ENST00000592060 CENPPQ6IPU0 288 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 TMTC1Q8IUR5 882 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 CNOT6LQ96LI5 555 aaKnown RBP17.6■□□□□ 0.41
MBD1-227ENST00000592060 AMNQ9BXJ7 453 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 HERC5Q9UII4 1024 aaKnown RBP17.6■□□□□ 0.41
MBD1-227ENST00000592060 A0A1W2PRG0 241 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 SLC26A4O43511 780 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 BMP3P12645 472 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 HOXA7P31268 230 aaPredicted RBP17.6■□□□□ 0.41
MBD1-227ENST00000592060 SNAP25P60880 206 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 PSMD1Q99460 953 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 TUBGCP2Q9BSJ2 902 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 CCDC94Q9BW85 323 aaPredicted RBP17.6■□□□□ 0.41
MBD1-227ENST00000592060 LRRC27Q9C0I9 530 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 SLC39A2Q9NP94 309 aa17.6■□□□□ 0.41
MBD1-227ENST00000592060 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.6■□□□□ 0.41
MBD1-227ENST00000592060 V9GYY5 206 aaPredicted RBP17.6■□□□□ 0.41
MBD1-227ENST00000592060 KDM3AQ9Y4C1 1321 aa17.59■□□□□ 0.41
MBD1-227ENST00000592060 DNM2P50570 870 aa17.59■□□□□ 0.41
MBD1-227ENST00000592060 GNG11P61952 73 aa17.59■□□□□ 0.41
MBD1-227ENST00000592060 MCTP2Q6DN12 878 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms