RNA–Protein interactions for RNA: ENST00000591756.1

TMC6-220, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-220ENST00000591756 TROAPQ12815 778 aa20.82■□□□□ 0.92
TMC6-220ENST00000591756 HOMER1Q86YM7 354 aa20.82■□□□□ 0.92
TMC6-220ENST00000591756 IGDCC4Q8TDY8 1250 aa20.82■□□□□ 0.92
TMC6-220ENST00000591756 RNPC3Q96LT9 517 aaKnown RBP20.82■□□□□ 0.92
TMC6-220ENST00000591756 RMDN3Q96TC7 470 aa20.82■□□□□ 0.92
TMC6-220ENST00000591756 ESYT1Q9BSJ8 1104 aa20.82■□□□□ 0.92
TMC6-220ENST00000591756 POLR3EQ9NVU0 708 aa20.82■□□□□ 0.92
TMC6-220ENST00000591756 NKRFO15226 690 aaKnown RBP eCLIP20.81■□□□□ 0.92
TMC6-220ENST00000591756 CYP2C18P33260 490 aa20.81■□□□□ 0.92
TMC6-220ENST00000591756 CPT1AP50416 773 aa20.81■□□□□ 0.92
TMC6-220ENST00000591756 TTLL4Q14679 1199 aa20.81■□□□□ 0.92
TMC6-220ENST00000591756 SEPT14Q6ZU15 432 aa20.81■□□□□ 0.92
TMC6-220ENST00000591756 PIGSQ96S52 555 aa20.81■□□□□ 0.92
TMC6-220ENST00000591756 TRPV6Q9H1D0 765 aa20.81■□□□□ 0.92
TMC6-220ENST00000591756 RIOX1Q9H6W3 641 aa20.81■□□□□ 0.92
TMC6-220ENST00000591756 GPHNQ9NQX3 736 aaPredicted RBP20.81■□□□□ 0.92
TMC6-220ENST00000591756 PCDHA1Q9Y5I3 950 aa20.81■□□□□ 0.92
TMC6-220ENST00000591756 EIF2AK2P19525 551 aaKnown RBP20.8■□□□□ 0.92
TMC6-220ENST00000591756 PURAQ00577 322 aaKnown RBP20.8■□□□□ 0.92
TMC6-220ENST00000591756 ARHGEF16Q5VV41 709 aa20.8■□□□□ 0.92
TMC6-220ENST00000591756 FAM109BQ6ICB4 259 aaPredicted RBP20.8■□□□□ 0.92
TMC6-220ENST00000591756 CENPQQ7L2Z9 268 aaPredicted RBP20.8■□□□□ 0.92
TMC6-220ENST00000591756 CATIPQ7Z7H3 387 aa20.8■□□□□ 0.92
TMC6-220ENST00000591756 FAM161BQ96MY7 647 aa20.8■□□□□ 0.92
TMC6-220ENST00000591756 IWS1Q96ST2 819 aa20.8■□□□□ 0.92
TMC6-220ENST00000591756 CYTH3O43739 400 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 B4GALT4O60513 344 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 CSF2RAP15509 400 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 HSD17B4P51659 736 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 PPIGQ13427 754 aaKnown RBP eCLIP20.79■□□□□ 0.921e-11■■■□□ 14.8
TMC6-220ENST00000591756 STXBP2Q15833 593 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 BRDTQ58F21 947 aaPredicted RBP20.79■□□□□ 0.92
TMC6-220ENST00000591756 CCDC62Q6P9F0 684 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 TMEM199Q8N511 208 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.79■□□□□ 0.922e-14■□□□□ 10.4
TMC6-220ENST00000591756 SEZ6LQ9BYH1 1024 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 COL6A3P12111 3177 aa20.79■□□□□ 0.92
TMC6-220ENST00000591756 A6NJR5 290 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 SLC27A2O14975 620 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 NR3C2P08235 984 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 SMAD3P84022 425 aaKnown RBP20.78■□□□□ 0.92
TMC6-220ENST00000591756 COL9A3Q14050 684 aaPredicted RBP20.78■□□□□ 0.92
TMC6-220ENST00000591756 LY6KQ17RY6 165 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 PPP1R13LQ8WUF5 828 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 PIBF1Q8WXW3 757 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 MTG1Q9BT17 334 aaPredicted RBP20.78■□□□□ 0.92
TMC6-220ENST00000591756 MYL10Q9BUA6 226 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 ALDH8A1Q9H2A2 487 aaPredicted RBP20.78■□□□□ 0.92
TMC6-220ENST00000591756 HIPK3Q9H422 1215 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 LY9Q9HBG7 655 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 PXMP2Q9NR77 195 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 UMODL1Q5DID0 1318 aa20.78■□□□□ 0.92
TMC6-220ENST00000591756 PRC1O43663 620 aa20.77■□□□□ 0.92
TMC6-220ENST00000591756 ACRP10323 421 aa20.77■□□□□ 0.92
TMC6-220ENST00000591756 HOXA13P31271 388 aaPredicted RBP20.77■□□□□ 0.92
TMC6-220ENST00000591756 GHRHRQ02643 423 aa20.77■□□□□ 0.92
TMC6-220ENST00000591756 BMP2KLQ5H9B9 411 aa20.77■□□□□ 0.92
TMC6-220ENST00000591756 ZNF697Q5TEC3 545 aa20.77■□□□□ 0.92
TMC6-220ENST00000591756 CREB3L3Q68CJ9 461 aa20.77■□□□□ 0.92
TMC6-220ENST00000591756 CASC1Q6TDU7 716 aa20.77■□□□□ 0.92
TMC6-220ENST00000591756 NOC4LQ9BVI4 516 aaKnown RBP20.77■□□□□ 0.92
TMC6-220ENST00000591756 ANO2Q9NQ90 1003 aa20.77■□□□□ 0.92
TMC6-220ENST00000591756 PNMA6FA0A0J9YX94 578 aa20.76■□□□□ 0.91
TMC6-220ENST00000591756 NECTIN1Q15223 517 aa20.76■□□□□ 0.91
TMC6-220ENST00000591756 NBPF20Q3BBV1 942 aa20.76■□□□□ 0.91
TMC6-220ENST00000591756 TMEM240Q5SV17 173 aa20.76■□□□□ 0.91
TMC6-220ENST00000591756 ZNF654Q8IZM8 581 aa20.76■□□□□ 0.91
TMC6-220ENST00000591756 GUCD1Q96NT3 240 aa20.76■□□□□ 0.91
TMC6-220ENST00000591756 TRMT13Q9NUP7 481 aaKnown RBP20.76■□□□□ 0.91
TMC6-220ENST00000591756 STXBP5LQ9Y2K9 1186 aa20.76■□□□□ 0.91
TMC6-220ENST00000591756 KIAA1217Q5T5P2 1943 aa20.76■□□□□ 0.91
TMC6-220ENST00000591756 KPNA6O60684 536 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 EIF3JO75822 258 aaKnown RBP20.75■□□□□ 0.91
TMC6-220ENST00000591756 GH1P01241 217 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 MYCLP12524 364 aaPredicted RBP20.75■□□□□ 0.91
TMC6-220ENST00000591756 MCM5P33992 734 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 CCL23P55773 120 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 ARHGAP1Q07960 439 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 FAM47CQ5HY64 1035 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 ZNF365Q70YC5 407 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 AFG1LQ8WV93 481 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 PDCD2LQ9BRP1 358 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 MAP3K20Q9NYL2 800 aaKnown RBP20.75■□□□□ 0.91
TMC6-220ENST00000591756 SCN10AQ9Y5Y9 1956 aa20.75■□□□□ 0.91
TMC6-220ENST00000591756 GCOM1H8Y6P7 765 aaPredicted RBP20.74■□□□□ 0.91
TMC6-220ENST00000591756 SH2B2O14492 632 aaPredicted RBP20.74■□□□□ 0.91
TMC6-220ENST00000591756 DDAH1O94760 285 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 POLR2MP0CAP2 368 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 CYP2C9P11712 490 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 CHMP4BP1P59074 171 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 TRAF1Q13077 416 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 NFXL1Q6ZNB6 911 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 CTCFLQ8NI51 663 aaPredicted RBP20.74■□□□□ 0.91
TMC6-220ENST00000591756 MTA3Q9BTC8 594 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 SEMA6BQ9H3T3 888 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 IL23AQ9NPF7 189 aa20.74■□□□□ 0.91
TMC6-220ENST00000591756 DDX41Q9UJV9 622 aaKnown RBP20.74■□□□□ 0.91
TMC6-220ENST00000591756 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.73■□□□□ 0.91
TMC6-220ENST00000591756 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms