RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, human

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00662-208	ENST00000591338	FOS	P01100	380 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	POLR2M	P0CAP2	368 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	CYP2C8	P10632	490 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	HOXA13	P31271	388 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	TRAPPC10	P48553	1259 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	INHBE	P58166	350 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	INF2	Q27J81	1249 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	MCF2L2	Q86YR7	1114 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	PGBD1	Q96JS3	809 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	PLSCR2	Q9NRY7	297 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	HOMER2	Q9NSB8	354 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	POLR3E	Q9NVU0	708 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	RABGAP1	Q9Y3P9	1069 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	PCDHB6	Q9Y5E3	794 aa		13.6	□□□□□ -0.23
LINC00662-208	ENST00000591338	NFIB	O00712	420 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	FIBP	O43427	364 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	NASP	P49321	788 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	HSD17B4	P51659	736 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	APLP1	P51693	650 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	GHRHR	Q02643	423 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	AP3B2	Q13367	1082 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	NBR1	Q14596	966 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	SF3A1	Q15459	793 aa	Known RBP	13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338		Q3C1V9	767 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	RIOX2	Q8IUF8	465 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	SAMD3	Q8N6K7	520 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	LINC00301	Q8NCQ3	95 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	TBCK	Q8TEA7	893 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	LEO1	Q8WVC0	666 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	SPATA32	Q96LK8	384 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	PAGR1	Q9BTK6	254 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	SPATC1L	Q9H0A9	340 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	TXNRD2	Q9NNW7	524 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	RNF146	Q9NTX7	359 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	LMBRD1	Q9NUN5	540 aa		13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	MAP3K20	Q9NYL2	800 aa	Known RBP	13.59	□□□□□ -0.23
LINC00662-208	ENST00000591338	WNT7A	O00755	349 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	EDIL3	O43854	480 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	YEATS4	O95619	227 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	HSPA6	P17066	643 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	SLC39A14	Q15043	492 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	STK38	Q15208	465 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	PTPA	Q15257	358 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	ZNF174	Q15697	407 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	CSPP1	Q1MSJ5	1256 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	DEFB115	Q30KQ5	88 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	TTC38	Q5R3I4	469 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	CYP4F22	Q6NT55	531 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	FCHSD1	Q86WN1	690 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	TMEM87A	Q8NBN3	555 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	CHST13	Q8NET6	341 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	ANO3	Q9BYT9	981 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338		A0A0G2JMZ2	1700 aa		13.58	□□□□□ -0.24
LINC00662-208	ENST00000591338	SPDYE3	A6NKU9	549 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	DDX11L8	A8MPP1	907 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	TM4SF4	P48230	202 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	GCLC	P48506	637 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	RNF207	Q6ZRF8	634 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	NEK8	Q86SG6	692 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	ZIC5	Q96T25	663 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	MAF1	Q9H063	256 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	ACAD9	Q9H845	621 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	ZCCHC17	Q9NP64	241 aa	Known RBP	13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	ELP1	O95163	1332 aa		13.57	□□□□□ -0.24
LINC00662-208	ENST00000591338	RASSF10	A6NK89	507 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	SPTLC2	O15270	562 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	SLC25A27	O95847	323 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	MCM7	P33993	719 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	USP11	P51784	963 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	RPS6	P62753	249 aa	Known RBP	13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	ERVK-9	P63128	1117 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	ERVK-24	P63145	666 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	GRM1	Q13255	1194 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	BAAT	Q14032	418 aa	Predicted RBP	13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	LETM2	Q2VYF4	491 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	NSMF	Q6X4W1	530 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	NCAPG2	Q86XI2	1143 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	GPRC5A	Q8NFJ5	357 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	PARK7	Q99497	189 aa	Known RBP	13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	COL20A1	Q9P218	1284 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	FBXO40	Q9UH90	709 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	CEP131	Q9UPN4	1083 aa		13.56	□□□□□ -0.24
LINC00662-208	ENST00000591338	MYH7B	A7E2Y1	1941 aa		13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	CCNT1	O60563	726 aa	Known RBP	13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	PPP6R2	O75170	966 aa		13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	GADD45B	O75293	160 aa	Predicted RBP	13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	ERCC3	P19447	782 aa		13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	MARCKS	P29966	332 aa	Predicted RBP	13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	SREBF1	P36956	1147 aa		13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	SREBF2	Q12772	1141 aa		13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	ANKRD13C	Q8N6S4	541 aa		13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	C4orf32	Q8N8J7	132 aa		13.55	□□□□□ -0.24
LINC00662-208	ENST00000591338	KCNG4	Q8TDN1	519 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms