RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CCT5P48643 541 aa18.85■□□□□ 0.61
SMARCA4-215ENST00000590574 MAP3K9P80192 1104 aa18.85■□□□□ 0.61
SMARCA4-215ENST00000590574 SLC7A5Q01650 507 aa18.85■□□□□ 0.61
SMARCA4-215ENST00000590574 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
SMARCA4-215ENST00000590574 CELF1Q92879 486 aaKnown RBP18.85■□□□□ 0.61
SMARCA4-215ENST00000590574 EPHB4P54760 987 aa18.85■□□□□ 0.61
SMARCA4-215ENST00000590574 CASP7P55210 303 aa18.85■□□□□ 0.61
SMARCA4-215ENST00000590574 GBP6Q6ZN66 633 aa18.85■□□□□ 0.61
SMARCA4-215ENST00000590574 VIMP08670 466 aaKnown RBP18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 KRT5P13647 590 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 STAT1P42224 750 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 ZYXQ15942 572 aaKnown RBP18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 COL4A3BPQ9Y5P4 624 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 UBAP1LF5GYI3 381 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 SLC16A2P36021 539 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 MRPS25P82663 173 aaKnown RBP18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 KRT71Q3SY84 523 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 CDK8P49336 464 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 CYP2J2P51589 502 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 GPR101Q96P66 508 aaPredicted RBP18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 EPB41L5Q9HCM4 733 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 SWAP70Q9UH65 585 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 FTCDO95954 541 aa18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 FKBP3Q00688 224 aaKnown RBP18.84■□□□□ 0.61
SMARCA4-215ENST00000590574 ARHGAP25P42331 645 aa18.83■□□□□ 0.61
SMARCA4-215ENST00000590574 KCTD1Q719H9 257 aa18.83■□□□□ 0.61
SMARCA4-215ENST00000590574 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.61
SMARCA4-215ENST00000590574 HEXIM1O94992 359 aaKnown RBP18.83■□□□□ 0.61
SMARCA4-215ENST00000590574 UBE2SQ16763 222 aa18.83■□□□□ 0.61
SMARCA4-215ENST00000590574 ARHGEF10LQ9HCE6 1279 aa18.83■□□□□ 0.61
SMARCA4-215ENST00000590574 ADD3Q9UEY8 706 aaKnown RBP18.83■□□□□ 0.61
SMARCA4-215ENST00000590574 NR2F2P24468 414 aa18.83■□□□□ 0.6
SMARCA4-215ENST00000590574 TEKT1Q969V4 418 aa18.83■□□□□ 0.6
SMARCA4-215ENST00000590574 TMEM47Q9BQJ4 181 aa18.83■□□□□ 0.6
SMARCA4-215ENST00000590574 EXOC3L4Q17RC7 722 aa18.83■□□□□ 0.6
SMARCA4-215ENST00000590574 RAD9BQ6WBX8 426 aa18.83■□□□□ 0.6
SMARCA4-215ENST00000590574 REXO1L1PQ8IX06 675 aa18.83■□□□□ 0.6
SMARCA4-215ENST00000590574 FAM133AQ8N9E0 248 aa18.83■□□□□ 0.6
SMARCA4-215ENST00000590574 HPSEQ9Y251 543 aa18.83■□□□□ 0.6
SMARCA4-215ENST00000590574 CYP4A11Q02928 519 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 CLEC4GQ6UXB4 293 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 SLC44A5Q8NCS7 719 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 CABS1Q96KC9 395 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 L2HGDHQ9H9P8 463 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 LIMA1Q9UHB6 759 aaKnown RBP18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 CCDC169A6NNP5 214 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 FXR1P51114 621 aaKnown RBP eCLIP18.82■□□□□ 0.63e-6■■■□□ 17.4
SMARCA4-215ENST00000590574 DDX12PQ92771 950 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 FAM84BQ96KN1 310 aaPredicted RBP18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 DPH5Q9H2P9 285 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 TTLL1O95922 423 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 BCRP11274 1271 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 LIG3P49916 1009 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 C3P01024 1663 aa18.82■□□□□ 0.6
SMARCA4-215ENST00000590574 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 TXNRD1Q16881 649 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 GSPT2Q8IYD1 628 aaKnown RBP18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 DOK7Q18PE1 504 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 ZNF34Q8IZ26 560 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 COL15A1P39059 1388 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 MON2Q7Z3U7 1717 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 H2AFZP0C0S5 128 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 SF3A3Q12874 501 aaKnown RBP eCLIP18.81■□□□□ 0.63e-6■■■■■ 28.1
SMARCA4-215ENST00000590574 GRM4Q14833 912 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 H2AFVQ71UI9 128 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 STAG2Q8N3U4 1231 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 hCG_1984214I3L0E3 225 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 SP4Q02446 784 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 NCAPHQ15003 741 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 ADAT2Q7Z6V5 191 aaKnown RBP18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 ZNF713Q8N859 430 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 KIFAP3Q92845 792 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 RAB17Q9H0T7 212 aa18.81■□□□□ 0.6
SMARCA4-215ENST00000590574 ORC4O43929 436 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 RASGRP2Q7LDG7 609 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 GJA10Q969M2 543 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 LRRC63Q05C16 580 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 SALL1Q9NSC2 1324 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 EZRP15311 586 aaKnown RBP18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 ATP1A1P05023 1023 aaKnown RBP18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 PLCB3Q01970 1234 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 SLFN13Q68D06 897 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 CHP1Q99653 195 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 CAPN7Q9Y6W3 813 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 GAS7O60861 476 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 SERPING1P05155 500 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 PSMD2Q13200 908 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 CERKLQ49MI3 558 aaPredicted RBP18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 CCDC105Q8IYK2 499 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 MLXIPQ9HAP2 919 aa18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 METTL14Q9HCE5 456 aaKnown RBP18.8■□□□□ 0.6
SMARCA4-215ENST00000590574 CALRP27797 417 aaKnown RBP18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 ELOA2Q8IYF1 753 aaPredicted RBP18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 FAM184BQ9ULE4 1060 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 POTEMA6NI47 508 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 VSNL1P62760 191 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 GPATCH4Q5T3I0 446 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms