RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, human

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN2-208	ENST00000590526	ZSCAN20	P17040	1043 aa	Predicted RBP	27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	RASSF7	Q02833	373 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	PDE4D	Q08499	809 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	ADSSL1	Q8N142	457 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	AMN	Q9BXJ7	453 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	FBXO28	Q9NVF7	368 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	ADD3	Q9UEY8	706 aa	Known RBP	27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	RWDD2A	Q9UIY3	292 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	MYMK	A6NI61	221 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	FXR2	P51116	673 aa	Known RBP eCLIP	27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	PPP4R3B	Q5MIZ7	849 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	SPECC1L	Q69YQ0	1117 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	CALML4	Q96GE6	196 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	RMND1	Q9NWS8	449 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	BCS1L	Q9Y276	419 aa		27.62	■■■□□ 2.01
RTN2-208	ENST00000590526	NKRF	O15226	690 aa	Known RBP eCLIP	27.61	■■■□□ 2.01
RTN2-208	ENST00000590526	R3HDM1	Q15032	1099 aa	Known RBP	27.61	■■■□□ 2.01
RTN2-208	ENST00000590526	TC2N	Q8N9U0	490 aa		27.61	■■■□□ 2.01
RTN2-208	ENST00000590526	TAOK3	Q9H2K8	898 aa		27.61	■■■□□ 2.01
RTN2-208	ENST00000590526	PRELP	P51888	382 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	PPP4R3A	Q6IN85	833 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	IRF2BP1	Q8IU81	584 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	TMEM139	Q8IV31	216 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	CYP2W1	Q8TAV3	490 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	KIFC2	Q96AC6	838 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	MYO1B	O43795	1136 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	TMEM266	Q2M3C6	531 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	CIAPIN1	Q6FI81	312 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	MYOZ2	Q9NPC6	264 aa		27.6	■■■□□ 2.01
RTN2-208	ENST00000590526	RHOBTB3	O94955	611 aa		27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	SAMD7	Q7Z3H4	446 aa		27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	FCHSD1	Q86WN1	690 aa		27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	GLIS3	Q8NEA6	775 aa		27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	CDK5RAP3	Q96JB5	506 aa		27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	SLC39A2	Q9NP94	309 aa		27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	ATAD5	Q96QE3	1844 aa		27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	PPP1R13B	Q96KQ4	1090 aa		27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	COL2A1	P02458	1487 aa	Predicted RBP	27.59	■■■□□ 2.01
RTN2-208	ENST00000590526	UBXN2A	P68543	259 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	PRR16	Q569H4	304 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	GIMAP8	Q8ND71	665 aa	Predicted RBP	27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	MYRIP	Q8NFW9	859 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	PCDHA12	Q9UN75	941 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	KCNJ18	B7U540	433 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	KCNJ12	Q14500	433 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	AGBL3	Q8NEM8	1001 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	TMX1	Q9H3N1	280 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	ARHGEF10L	Q9HCE6	1279 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	PGAP2	Q9UHJ9	254 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	FZD1	Q9UP38	647 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	TMX2	Q9Y320	296 aa		27.58	■■■□□ 2.01
RTN2-208	ENST00000590526	ARHGAP4	P98171	946 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	RBL2	Q08999	1139 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	GRIPAP1	Q4V328	841 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	NYAP1	Q6ZVC0	841 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	KIAA0895	Q8NCT3	520 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	EXOC1	Q9NV70	894 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	RNF225	M0QZC1	329 aa	Predicted RBP	27.57	■■■□□ 2
RTN2-208	ENST00000590526	STAT2	P52630	851 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	RASA3	Q14644	834 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	KCNB1	Q14721	858 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	MTF1	Q14872	753 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	JDP2	Q8WYK2	163 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	LARP4B	Q92615	738 aa	Known RBP	27.57	■■■□□ 2
RTN2-208	ENST00000590526	C7orf25	Q9BPX7	421 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	GJA3	Q9Y6H8	435 aa		27.57	■■■□□ 2
RTN2-208	ENST00000590526	FAM86B1	E9PN63	330 aa		27.56	■■■□□ 2
RTN2-208	ENST00000590526	FAM86B2	P0C5J1	330 aa		27.56	■■■□□ 2
RTN2-208	ENST00000590526	CACNB1	Q02641	598 aa	Predicted RBP	27.56	■■■□□ 2
RTN2-208	ENST00000590526	TCP11X2	Q5H9J9	407 aa		27.56	■■■□□ 2
RTN2-208	ENST00000590526	KRT79	Q5XKE5	535 aa		27.56	■■■□□ 2
RTN2-208	ENST00000590526	BBX	Q8WY36	941 aa	Predicted RBP	27.56	■■■□□ 2
RTN2-208	ENST00000590526	ZBED3	Q96IU2	234 aa	Predicted RBP	27.56	■■■□□ 2
RTN2-208	ENST00000590526	SRRT	Q9BXP5	876 aa	Known RBP	27.56	■■■□□ 2
RTN2-208	ENST00000590526	PSD	A5PKW4	1024 aa	Predicted RBP	27.56	■■■□□ 2
RTN2-208	ENST00000590526		E9PMD0	336 aa		27.56	■■■□□ 2
RTN2-208	ENST00000590526	SSB	P05455	408 aa	Known RBP eCLIP	27.56	■■■□□ 2
RTN2-208	ENST00000590526	RAD51AP2	Q09MP3	1159 aa		27.56	■■■□□ 2
RTN2-208	ENST00000590526	PTPN14	Q15678	1187 aa		27.56	■■■□□ 2
RTN2-208	ENST00000590526	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.56	■■■□□ 2
RTN2-208	ENST00000590526	SV2B	Q7L1I2	683 aa		27.56	■■■□□ 2
RTN2-208	ENST00000590526	POTEB3	A0JP26	581 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	POTEC	B2RU33	542 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	N4BP3	O15049	544 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	IDE	P14735	1019 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	CAP2	P40123	477 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	TGFB2	P61812	414 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	ORC2	Q13416	577 aa	Predicted RBP	27.55	■■■□□ 2
RTN2-208	ENST00000590526	CT47A1	Q5JQC4	288 aa	Predicted RBP	27.55	■■■□□ 2
RTN2-208	ENST00000590526	POTEB	Q6S5H4	581 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	TRIM47	Q96LD4	638 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	NPHP3-ACAD11	A0A0J9YXS1	232 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	PBX1	P40424	430 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	COPB1	P53618	953 aa	Known RBP	27.55	■■■□□ 2
RTN2-208	ENST00000590526	LRRC41	Q15345	812 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	RAD54L	Q92698	747 aa		27.55	■■■□□ 2
RTN2-208	ENST00000590526	DUSP9	Q99956	384 aa	Known RBP	27.55	■■■□□ 2
RTN2-208	ENST00000590526	CFB	P00751	764 aa		27.54	■■■□□ 2
RTN2-208	ENST00000590526	ERCC3	P19447	782 aa		27.54	■■■□□ 2
RTN2-208	ENST00000590526	PRAMEF18	Q5VWM3	479 aa		27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms