RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 MSL3Q8N5Y2 521 aaKnown RBP13.81□□□□□ -0.2
APOC1-206ENST00000590334 NPLOC4Q8TAT6 608 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 MORC4Q8TE76 937 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 TNFRSF25Q93038 417 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 MAML3Q96JK9 1138 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 PURBQ96QR8 312 aaKnown RBP13.81□□□□□ -0.2
APOC1-206ENST00000590334 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 PXMP2Q9NR77 195 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
APOC1-206ENST00000590334 ADD3Q9UEY8 706 aaKnown RBP13.81□□□□□ -0.2
APOC1-206ENST00000590334 PCDHA6Q9UN73 950 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 PCDHA8Q9Y5H6 950 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 CENPFP49454 3210 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 SPDYE3A6NKU9 549 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 EDNRBP24530 442 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.2
APOC1-206ENST00000590334 ALDH5A1P51649 535 aaPredicted RBP13.8□□□□□ -0.2
APOC1-206ENST00000590334 FOSBP53539 338 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 GUCY1B3Q02153 619 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
APOC1-206ENST00000590334 OLFML2BQ68BL8 750 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 FCHSD1Q86WN1 690 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 DIS3L2Q8IYB7 885 aaKnown RBP13.8□□□□□ -0.2
APOC1-206ENST00000590334 TRMT44Q8IYL2 757 aaKnown RBP13.8□□□□□ -0.2
APOC1-206ENST00000590334 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 OXER1Q8TDS5 423 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 NSUN6Q8TEA1 469 aaKnown RBP13.8□□□□□ -0.2
APOC1-206ENST00000590334 CRYGNQ8WXF5 182 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 IWS1Q96ST2 819 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 RMDN3Q96TC7 470 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 FOXP1Q9H334 677 aaPredicted RBP13.8□□□□□ -0.2
APOC1-206ENST00000590334 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 PRDM10Q9NQV6 1147 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 TMEM260Q9NX78 707 aa13.8□□□□□ -0.2
APOC1-206ENST00000590334 BTBD18B2RXH4 712 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 H3BQV1 296 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 CYP2B6P20813 491 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 DDIT3P35638 169 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 SREBF1P36956 1147 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 JAKMIP3Q5VZ66 844 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 KRT25Q7Z3Z0 450 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 PXYLP1Q8TE99 480 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 PDCD2LQ9BRP1 358 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 ANO3Q9BYT9 981 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 EHMT1Q9H9B1 1298 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 TRIM17Q9Y577 477 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 SYNGAP1Q96PV0 1343 aa13.79□□□□□ -0.2
APOC1-206ENST00000590334 FRMPD3Q5JV73 1810 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 ASB14A6NK59 587 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 B4DLN1 442 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 STX6O43752 255 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 NR5A1Q13285 461 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 PGM5Q15124 567 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 ARHGEF16Q5VV41 709 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 PCNX4Q63HM2 1172 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 XRRA1Q6P2D8 792 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 CTU1Q7Z7A3 348 aaKnown RBP13.78□□□□□ -0.2
APOC1-206ENST00000590334 RASGRP4Q8TDF6 673 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 MPHOSPH6Q99547 160 aaKnown RBP13.78□□□□□ -0.2
APOC1-206ENST00000590334 TINF2Q9BSI4 451 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 FLRT1Q9NZU1 646 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 PTPN22Q9Y2R2 807 aa13.78□□□□□ -0.2
APOC1-206ENST00000590334 STAM2O75886 525 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 CYP3A4P08684 503 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 EIF2AK2P19525 551 aaKnown RBP13.77□□□□□ -0.21
APOC1-206ENST00000590334 NONOQ15233 471 aaKnown RBP eCLIP13.77□□□□□ -0.21
APOC1-206ENST00000590334 PKN2Q16513 984 aaKnown RBP13.77□□□□□ -0.21
APOC1-206ENST00000590334 CCL14Q16627 93 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 VSIG10LQ86VR7 867 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 NOSTRINQ8IVI9 506 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 RAET1EQ8TD07 263 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 TRIB2Q92519 343 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 IPO9Q96P70 1041 aaKnown RBP13.77□□□□□ -0.21
APOC1-206ENST00000590334 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
APOC1-206ENST00000590334 MTMR6Q9Y217 621 aa13.77□□□□□ -0.21
APOC1-206ENST00000590334 CCDC194A0A1B0GVG4 234 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 VPS37CA5D8V6 355 aaPredicted RBP13.76□□□□□ -0.21
APOC1-206ENST00000590334 KIF28PB7ZC32 967 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 EDIL3O43854 480 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 ADCY3O60266 1144 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 NR3C2P08235 984 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 CCND2P30279 289 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 USP11P51784 963 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 MRPS9P82933 396 aaKnown RBP13.76□□□□□ -0.21
APOC1-206ENST00000590334 ARHGAP4P98171 946 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 STXBP2Q15833 593 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 EARS2Q5JPH6 523 aaKnown RBP13.76□□□□□ -0.21
APOC1-206ENST00000590334 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 IL31RAQ8NI17 732 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 PGBD1Q96JS3 809 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 KATNBL1Q9H079 304 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 PTCH2Q9Y6C5 1203 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 DOCK5Q9H7D0 1870 aa13.76□□□□□ -0.21
APOC1-206ENST00000590334 EIF3JO75822 258 aaKnown RBP13.75□□□□□ -0.21
APOC1-206ENST00000590334 SNAI1O95863 264 aaPredicted RBP13.75□□□□□ -0.21
APOC1-206ENST00000590334 CIITAP33076 1130 aa13.75□□□□□ -0.21
APOC1-206ENST00000590334 PDE4DQ08499 809 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms