RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 KIAA1217Q5T5P2 1943 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 GNAQP50148 359 aa21.1■□□□□ 0.97
DDX39A-212ENST00000590260 PDE4DQ08499 809 aa21.1■□□□□ 0.97
DDX39A-212ENST00000590260 DUSP28Q4G0W2 176 aa21.1■□□□□ 0.97
DDX39A-212ENST00000590260 TLK2Q86UE8 772 aa21.1■□□□□ 0.97
DDX39A-212ENST00000590260 BRF1Q92994 677 aa21.1■□□□□ 0.97
DDX39A-212ENST00000590260 RRP36Q96EU6 259 aaKnown RBP21.1■□□□□ 0.97
DDX39A-212ENST00000590260 ZSWIM6Q9HCJ5 1215 aa21.1■□□□□ 0.97
DDX39A-212ENST00000590260 LTBP2Q14767 1821 aa21.1■□□□□ 0.97
DDX39A-212ENST00000590260 ZBTB43O43298 467 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 RGS20O76081 388 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 SEC24BO95487 1268 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 ASGR1P07306 291 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 EIF2AK2P19525 551 aaKnown RBP21.09■□□□□ 0.97
DDX39A-212ENST00000590260 CASTP20810 708 aaKnown RBP21.09■□□□□ 0.97
DDX39A-212ENST00000590260 TRIM60Q495X7 471 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 C1orf53Q5VUE5 145 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 CCDC62Q6P9F0 684 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 NSUN6Q8TEA1 469 aaKnown RBP21.09■□□□□ 0.97
DDX39A-212ENST00000590260 COPS5Q92905 334 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 WDR11Q9BZH6 1224 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 NID2Q14112 1375 aa21.09■□□□□ 0.97
DDX39A-212ENST00000590260 MEIS2O14770 477 aa21.08■□□□□ 0.97
DDX39A-212ENST00000590260 DYNC1LI2O43237 492 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-212ENST00000590260 TOB2Q14106 344 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-212ENST00000590260 TYW1BQ6NUM6 668 aa21.08■□□□□ 0.97
DDX39A-212ENST00000590260 CHRDL2Q6WN34 429 aa21.08■□□□□ 0.97
DDX39A-212ENST00000590260 PDCD2LQ9BRP1 358 aa21.08■□□□□ 0.97
DDX39A-212ENST00000590260 MAP3K20Q9NYL2 800 aaKnown RBP21.08■□□□□ 0.97
DDX39A-212ENST00000590260 FRMPD4Q14CM0 1322 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 MOXD2PA6NHM9 499 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 GOLGA8AA7E2F4 631 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 GOLGA8BA8MQT2 603 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 NR3C2P08235 984 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 ADD1P35611 737 aaKnown RBP21.07■□□□□ 0.96
DDX39A-212ENST00000590260 PGM5Q15124 567 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 RTN1Q16799 776 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 GNASQ5JWF2 1037 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 USP17L6PQ6QN14 398 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 RUFY3Q7L099 469 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 ZFP91Q96JP5 570 aaPredicted RBP21.07■□□□□ 0.96
DDX39A-212ENST00000590260 IWS1Q96ST2 819 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 GDF15Q99988 308 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 ATP11BQ9Y2G3 1177 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 Q9Y3F1 56 aa21.07■□□□□ 0.96
DDX39A-212ENST00000590260 CEP290O15078 2479 aa21.06■□□□□ 0.96
DDX39A-212ENST00000590260 GCOM1H8Y6P7 765 aaPredicted RBP21.06■□□□□ 0.96
DDX39A-212ENST00000590260 POLR2MP0CAP2 368 aa21.06■□□□□ 0.96
DDX39A-212ENST00000590260 RCAN1P53805 252 aa21.06■□□□□ 0.96
DDX39A-212ENST00000590260 EVCP57679 992 aa21.06■□□□□ 0.96
DDX39A-212ENST00000590260 FSCN1Q16658 493 aaKnown RBP21.06■□□□□ 0.96
DDX39A-212ENST00000590260 ARHGEF16Q5VV41 709 aa21.06■□□□□ 0.96
DDX39A-212ENST00000590260 SYNE3Q6ZMZ3 975 aa21.06■□□□□ 0.96
DDX39A-212ENST00000590260 NOL8Q76FK4 1167 aaKnown RBP21.06■□□□□ 0.96
DDX39A-212ENST00000590260 SH3RF1Q7Z6J0 888 aa21.06■□□□□ 0.96
DDX39A-212ENST00000590260 SAMD3Q8N6K7 520 aa21.06■□□□□ 0.96
DDX39A-212ENST00000590260 GPKOWQ92917 476 aaPredicted RBP eCLIP21.06■□□□□ 0.968e-6■■□□□ 13.6
DDX39A-212ENST00000590260 RBM28Q9NW13 759 aaKnown RBP21.06■□□□□ 0.96
DDX39A-212ENST00000590260 RBM27Q9P2N5 1060 aaKnown RBP21.06■□□□□ 0.96
DDX39A-212ENST00000590260 GRIN2DO15399 1336 aa21.05■□□□□ 0.96
DDX39A-212ENST00000590260 PSMA5P28066 241 aa21.05■□□□□ 0.96
DDX39A-212ENST00000590260 CDK7P50613 346 aa21.05■□□□□ 0.96
DDX39A-212ENST00000590260 STXBP2Q15833 593 aa21.05■□□□□ 0.96
DDX39A-212ENST00000590260 WWC2Q6AWC2 1192 aa21.05■□□□□ 0.96
DDX39A-212ENST00000590260 FCHSD1Q86WN1 690 aa21.05■□□□□ 0.96
DDX39A-212ENST00000590260 SCFD2Q8WU76 684 aa21.05■□□□□ 0.96
DDX39A-212ENST00000590260 UPF3BQ9BZI7 483 aaKnown RBP21.05■□□□□ 0.96
DDX39A-212ENST00000590260 TM6SF1Q9BZW5 370 aa21.05■□□□□ 0.96
DDX39A-212ENST00000590260 RANBP2P49792 3224 aaKnown RBP21.05■□□□□ 0.96
DDX39A-212ENST00000590260 MRPS9P82933 396 aaKnown RBP21.04■□□□□ 0.96
DDX39A-212ENST00000590260 TLE2Q04725 743 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 TRAF1Q13077 416 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 NTRK3Q16288 839 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 HABP4Q5JVS0 413 aaKnown RBP21.04■□□□□ 0.96
DDX39A-212ENST00000590260 CXCL17Q6UXB2 119 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 SEPT14Q6ZU15 432 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 VSIG10LQ86VR7 867 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 PCSK9Q8NBP7 692 aaKnown RBP21.04■□□□□ 0.96
DDX39A-212ENST00000590260 SPC25Q9HBM1 224 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 STARD7Q9NQZ5 370 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 PDLIM7Q9NR12 457 aa21.04■□□□□ 0.96
DDX39A-212ENST00000590260 SEC63Q9UGP8 760 aaKnown RBP21.04■□□□□ 0.96
DDX39A-212ENST00000590260 TRIM43BA6NCK2 446 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 PIK3CDO00329 1044 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 TXNP10599 105 aaKnown RBP21.03■□□□□ 0.96
DDX39A-212ENST00000590260 ITGB8P26012 769 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 PDIA3P30101 505 aaKnown RBP21.03■□□□□ 0.96
DDX39A-212ENST00000590260 MAGEA10P43363 369 aaPredicted RBP21.03■□□□□ 0.96
DDX39A-212ENST00000590260 ARHGAP1Q07960 439 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 PPP2R5BQ15173 497 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 LY6KQ17RY6 165 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 SLC43A3Q8NBI5 491 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 TRIM43Q96BQ3 446 aaPredicted RBP21.03■□□□□ 0.96
DDX39A-212ENST00000590260 MPHOSPH6Q99547 160 aaKnown RBP21.03■□□□□ 0.96
DDX39A-212ENST00000590260 LARP6Q9BRS8 491 aaKnown RBP21.03■□□□□ 0.96
DDX39A-212ENST00000590260 AP5M1Q9H0R1 490 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 V9GY48 417 aaPredicted RBP21.03■□□□□ 0.96
DDX39A-212ENST00000590260 ELP1O95163 1332 aa21.03■□□□□ 0.96
DDX39A-212ENST00000590260 ADAMTS3O15072 1205 aa21.02■□□□□ 0.96
DDX39A-212ENST00000590260 EIF3JO75822 258 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms