RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 FBXO11Q86XK2 927 aa9.68□□□□□ -0.86
TPM4-211ENST00000589897 MCF2L2Q86YR7 1114 aa9.68□□□□□ -0.86
TPM4-211ENST00000589897 FBXO16Q8IX29 292 aaPredicted RBP9.68□□□□□ -0.86
TPM4-211ENST00000589897 ADGRF4Q8IZF3 695 aa9.68□□□□□ -0.86
TPM4-211ENST00000589897 NCOA7Q8NI08 942 aa9.68□□□□□ -0.86
TPM4-211ENST00000589897 ANKS1AQ92625 1134 aa9.68□□□□□ -0.86
TPM4-211ENST00000589897 HLA-CQ95604 372 aa9.68□□□□□ -0.86
TPM4-211ENST00000589897 UPF3AQ9H1J1 476 aaKnown RBP9.68□□□□□ -0.86
TPM4-211ENST00000589897 NKX2-4Q9H2Z4 354 aa9.68□□□□□ -0.86
TPM4-211ENST00000589897 CPVLQ9H3G5 476 aa9.68□□□□□ -0.86
TPM4-211ENST00000589897 ABCB11O95342 1321 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.67□□□□□ -0.86
TPM4-211ENST00000589897 MYADML2A6NDP7 307 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 SGSM2O43147 1006 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 CABYRO75952 493 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 SMPD1P17405 629 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 RPS6P62753 249 aaKnown RBP9.67□□□□□ -0.86
TPM4-211ENST00000589897 PTH1RQ03431 593 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 TRAF1Q13077 416 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 WTAPQ15007 396 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 FSCN1Q16658 493 aaKnown RBP9.67□□□□□ -0.86
TPM4-211ENST00000589897 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 SLC30A10Q6XR72 485 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 C16orf59Q7L2K0 433 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 DNERQ8NFT8 737 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 PURBQ96QR8 312 aaKnown RBP9.67□□□□□ -0.86
TPM4-211ENST00000589897 WDR11Q9BZH6 1224 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 KATNBL1Q9H079 304 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 IL25Q9H293 177 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 C11orf16Q9NQ32 467 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 GPHNQ9NQX3 736 aaPredicted RBP9.67□□□□□ -0.86
TPM4-211ENST00000589897 PDGFCQ9NRA1 345 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 MRPL11Q9Y3B7 192 aaKnown RBP9.67□□□□□ -0.86
TPM4-211ENST00000589897 Q9Y3F1 56 aa9.67□□□□□ -0.86
TPM4-211ENST00000589897 DDX49Q9Y6V7 483 aaKnown RBP9.67□□□□□ -0.86
TPM4-211ENST00000589897 CDH23Q9H251 3354 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 FAM86C2PA6NEL3 165 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 KLRF2D3W0D1 207 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 E7EWF7 191 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 ARVCFO00192 962 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 ADCY6O43306 1168 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CYP21A2P08686 494 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 ALADP13716 330 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CSF2RAP15509 400 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CPT1AP50416 773 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 IRX5P78411 483 aaPredicted RBP9.66□□□□□ -0.86
TPM4-211ENST00000589897 PPP2R5BQ15173 497 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 QRICH1Q2TAL8 776 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 TMEM67Q5HYA8 995 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 PPP2R2DQ66LE6 453 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CCSAPQ6IQ19 270 aaPredicted RBP9.66□□□□□ -0.86
TPM4-211ENST00000589897 TAPT1Q6NXT6 567 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CASC1Q6TDU7 716 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CXCL17Q6UXB2 119 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CYB5R4Q7L1T6 521 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CENPQQ7L2Z9 268 aaPredicted RBP9.66□□□□□ -0.86
TPM4-211ENST00000589897 CATIPQ7Z7H3 387 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
TPM4-211ENST00000589897 RGS22Q8NE09 1264 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 CLEC4DQ8WXI8 215 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 UIMC1Q96RL1 719 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 AMNQ9BXJ7 453 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 TBX21Q9UL17 535 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 PCDHA11Q9Y5I1 949 aa9.66□□□□□ -0.86
TPM4-211ENST00000589897 ASTN1O14525 1302 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 NKRFO15226 690 aaKnown RBP eCLIP9.65□□□□□ -0.86
TPM4-211ENST00000589897 CFBP00751 764 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 NHLH1Q02575 133 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 TTLL4Q14679 1199 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 DUSP28Q4G0W2 176 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 ARHGEF16Q5VV41 709 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 NFXL1Q6ZNB6 911 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 CHST3Q7LGC8 479 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 HOMER1Q86YM7 354 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 OR6J1Q8NGC5 347 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 MORC4Q8TE76 937 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 NSUN6Q8TEA1 469 aaKnown RBP9.65□□□□□ -0.86
TPM4-211ENST00000589897 SCFD2Q8WU76 684 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 MAP4K1Q92918 833 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 SEZ6LQ9BYH1 1024 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 MAF1Q9H063 256 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 JMJD4Q9H9V9 463 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 IL23AQ9NPF7 189 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 POLR3EQ9NVU0 708 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 GNEQ9Y223 722 aaKnown RBP9.65□□□□□ -0.86
TPM4-211ENST00000589897 RBM8AQ9Y5S9 174 aaKnown RBP9.65□□□□□ -0.86
TPM4-211ENST00000589897 LTBP2Q14767 1821 aa9.65□□□□□ -0.86
TPM4-211ENST00000589897 LCTP09848 1927 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 ZBTB5O15062 677 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 MYL3P08590 195 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 ACRP10323 421 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 TXNP10599 105 aaKnown RBP9.64□□□□□ -0.87
TPM4-211ENST00000589897 ITGA7Q13683 1181 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 SEC23AQ15436 765 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 STXBP2Q15833 593 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 RPUSD2Q8IZ73 545 aaKnown RBP9.64□□□□□ -0.87
TPM4-211ENST00000589897 STAG2Q8N3U4 1231 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 CTCFLQ8NI51 663 aaPredicted RBP9.64□□□□□ -0.87
TPM4-211ENST00000589897 IWS1Q96ST2 819 aa9.64□□□□□ -0.87
TPM4-211ENST00000589897 RMDN3Q96TC7 470 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms