RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SEC23AQ15436 765 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 ANO3Q9BYT9 981 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 NR2F2P24468 414 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 ZNF772Q68DY9 489 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-208ENST00000589797 EEPD1Q7L9B9 569 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 ADAT2Q7Z6V5 191 aaKnown RBP16.14■□□□□ 0.17
RETREG3-208ENST00000589797 FAM178BQ8IXR5 827 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 CNTNAP5Q8WYK1 1306 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 EIF2AK2P19525 551 aaKnown RBP16.13■□□□□ 0.17
RETREG3-208ENST00000589797 DEFB132Q7Z7B7 95 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 COL23A1Q86Y22 540 aaPredicted RBP16.13■□□□□ 0.17
RETREG3-208ENST00000589797 CCDC66A2RUB6 948 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 STAT2P52630 851 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 ODR4Q5SWX8 454 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 MIER3Q7Z3K6 550 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 KLHL7Q8IXQ5 586 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 GLT8D2Q9H1C3 349 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 SMIM23A6NLE4 172 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 SYDE2Q5VT97 1194 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 ARL6IP4Q66PJ3 421 aaKnown RBP16.13■□□□□ 0.17
RETREG3-208ENST00000589797 PCIF1Q9H4Z3 704 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 ATP6V0A2Q9Y487 856 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 GSTTP1A0A1W2PQM5 241 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 POTEFA5A3E0 1075 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 ZBTB5O15062 677 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 XRCC5P13010 732 aaKnown RBP16.13■□□□□ 0.17
RETREG3-208ENST00000589797 RASSF7Q02833 373 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 TRIM14Q14142 442 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 POTEGQ6S5H5 508 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 POTEEQ6S8J3 1075 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 SLC30A10Q6XR72 485 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 ZNF579Q8NAF0 562 aaKnown RBP16.13■□□□□ 0.17
RETREG3-208ENST00000589797 ZNF341Q9BYN7 854 aa16.13■□□□□ 0.17
RETREG3-208ENST00000589797 DHX36Q9H2U1 1008 aaKnown RBP16.13■□□□□ 0.17
RETREG3-208ENST00000589797 FOXP2O15409 715 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 PLA2G4BP0C869 781 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 KRT5P13647 590 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 RABGAP1Q9Y3P9 1069 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
RETREG3-208ENST00000589797 SLC10A5Q5PT55 438 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 MYO6Q9UM54 1294 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 CKAP4Q07065 602 aaKnown RBP16.12■□□□□ 0.17
RETREG3-208ENST00000589797 ASIC2Q16515 512 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 FAM102BQ5T8I3 360 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 SFMBT2Q5VUG0 894 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
RETREG3-208ENST00000589797 ZBED4O75132 1171 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 SF3A3Q12874 501 aaKnown RBP eCLIP16.11■□□□□ 0.17
RETREG3-208ENST00000589797 PKN1Q16512 942 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 UBE2Q2Q8WVN8 375 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 RWDD2AQ9UIY3 292 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 CCNE1P24864 410 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 STK4Q13043 487 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 XKR9Q5GH70 373 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 SLC27A3Q5K4L6 730 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 TMC4Q7Z404 712 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 MAP3K14Q99558 947 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 NAP1L4Q99733 375 aaKnown RBP16.11■□□□□ 0.17
RETREG3-208ENST00000589797 NUP58Q9BVL2 599 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 IL17RBQ9NRM6 502 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 PDHBP11177 359 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 SBK1Q52WX2 424 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 E4F1Q66K89 784 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-208ENST00000589797 AK8Q96MA6 479 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 ZNF577Q9BSK1 485 aa16.11■□□□□ 0.17
RETREG3-208ENST00000589797 NAA15Q9BXJ9 866 aaKnown RBP16.11■□□□□ 0.17
RETREG3-208ENST00000589797 NPHP3-ACAD11A0A0J9YXS1 232 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 CEP104O60308 925 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 NEFHP12036 1026 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 ARHGEF16Q5VV41 709 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 OSBPL5Q9H0X9 879 aaPredicted RBP16.1■□□□□ 0.17
RETREG3-208ENST00000589797 EMILIN3Q9NT22 766 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 SAR1BQ9Y6B6 198 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 FAM205AQ6ZU69 1335 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 TUBB4AP04350 444 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 CDR1P51861 262 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 RGL1Q9NZL6 768 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 TMOD4Q9NZQ9 345 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 TFR2Q9UP52 801 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 TLDC2A0PJX2 215 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 TNFAIP3P21580 790 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 KIAA0753Q2KHM9 967 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 MRPL11Q9Y3B7 192 aaKnown RBP16.1■□□□□ 0.17
RETREG3-208ENST00000589797 PCDHAC2Q9Y5I4 1007 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 KNDC1Q76NI1 1749 aa16.1■□□□□ 0.17
RETREG3-208ENST00000589797 PPP1R2P41236 205 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 TMEM179Q6ZVK1 233 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 U2AF1L4Q8WU68 220 aaKnown RBP16.09■□□□□ 0.17
RETREG3-208ENST00000589797 MTA3Q9BTC8 594 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 PRM3Q9NNZ6 103 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 MYO1AQ9UBC5 1043 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 TTC26A0AVF1 554 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-208ENST00000589797 SRGAP2O75044 1071 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 LRRN2O75325 713 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 DLATP10515 647 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms