RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 RALYLQ86SE5 291 aaKnown RBP16.72■□□□□ 0.27
MBD1-220ENST00000589758 SKAP1Q86WV1 359 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 SYTL5Q8TDW5 730 aaPredicted RBP16.72■□□□□ 0.27
MBD1-220ENST00000589758 TAAR1Q96RJ0 339 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 MTG1Q9BT17 334 aaPredicted RBP16.72■□□□□ 0.27
MBD1-220ENST00000589758 IL23AQ9NPF7 189 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 MAP3K20Q9NYL2 800 aaKnown RBP16.72■□□□□ 0.27
MBD1-220ENST00000589758 PALM3A6NDB9 673 aaPredicted RBP16.71■□□□□ 0.27
MBD1-220ENST00000589758 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.27
MBD1-220ENST00000589758 SGSM2O43147 1006 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 PTH1RQ03431 593 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 TRAF1Q13077 416 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 SART3Q15020 963 aaKnown RBP16.71■□□□□ 0.27
MBD1-220ENST00000589758 STXBP2Q15833 593 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 ZNF365Q70YC5 407 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 C16orf59Q7L2K0 433 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 STAG2Q8N3U4 1231 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 SAMD3Q8N6K7 520 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 TBC1D5Q92609 795 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 RMDN3Q96TC7 470 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 CDX2Q99626 313 aaPredicted RBP16.71■□□□□ 0.27
MBD1-220ENST00000589758 TRPV6Q9H1D0 765 aa16.71■□□□□ 0.27
MBD1-220ENST00000589758 ALDH8A1Q9H2A2 487 aaPredicted RBP16.71■□□□□ 0.27
MBD1-220ENST00000589758 MTIF3Q9H2K0 278 aaKnown RBP16.71■□□□□ 0.27
MBD1-220ENST00000589758 E7EWF7 191 aa16.7■□□□□ 0.26
MBD1-220ENST00000589758 RASIP1Q5U651 963 aa16.7■□□□□ 0.26
MBD1-220ENST00000589758 ARHGEF16Q5VV41 709 aa16.7■□□□□ 0.26
MBD1-220ENST00000589758 RPUSD2Q8IZ73 545 aaKnown RBP16.7■□□□□ 0.26
MBD1-220ENST00000589758 MTMR8Q96EF0 704 aa16.7■□□□□ 0.26
MBD1-220ENST00000589758 NOC4LQ9BVI4 516 aaKnown RBP16.7■□□□□ 0.26
MBD1-220ENST00000589758 TTYH1Q9H313 450 aaPredicted RBP16.7■□□□□ 0.26
MBD1-220ENST00000589758 MAD2L2Q9UI95 211 aa16.7■□□□□ 0.26
MBD1-220ENST00000589758 ZBTB5O15062 677 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 CFBP00751 764 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 GH1P01241 217 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 FGBP02675 491 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 ACRP10323 421 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 GHRHRQ02643 423 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 PTPN11Q06124 597 aaPredicted RBP16.69■□□□□ 0.26
MBD1-220ENST00000589758 WTAPQ15007 396 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 NFRKBQ6P4R8 1299 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 CCDC62Q6P9F0 684 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 HERVK_113Q902F9 699 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 COPS5Q92905 334 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 MAP4K1Q92918 833 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 COL20A1Q9P218 1284 aa16.69■□□□□ 0.26
MBD1-220ENST00000589758 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
MBD1-220ENST00000589758 DNAJB2P25686 324 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 HSD17B4P51659 736 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 CCL23P55773 120 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 GRM4Q14833 912 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 FAM47CQ5HY64 1035 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 SEPT14Q6ZU15 432 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 TIFAQ96CG3 184 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 RIOX1Q9H6W3 641 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 PXMP2Q9NR77 195 aa16.68■□□□□ 0.26
MBD1-220ENST00000589758 DLL1O00548 723 aa16.67■□□□□ 0.26
MBD1-220ENST00000589758 ARIH2O95376 493 aa16.67■□□□□ 0.26
MBD1-220ENST00000589758 NR3C2P08235 984 aa16.67■□□□□ 0.26
MBD1-220ENST00000589758 PFKMP08237 780 aa16.67■□□□□ 0.26
MBD1-220ENST00000589758 PCDHA1Q9Y5I3 950 aa16.67■□□□□ 0.26
MBD1-220ENST00000589758 UMODL1Q5DID0 1318 aa16.67■□□□□ 0.26
MBD1-220ENST00000589758 SCN10AQ9Y5Y9 1956 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 OPLAHO14841 1288 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 EIF2AK2P19525 551 aaKnown RBP16.66■□□□□ 0.26
MBD1-220ENST00000589758 CASTP20810 708 aaKnown RBP16.66■□□□□ 0.26
MBD1-220ENST00000589758 TROAPQ12815 778 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 LY6KQ17RY6 165 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 CATIPQ7Z7H3 387 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 MYLIPQ8WY64 445 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 MTA3Q9BTC8 594 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 WNT8AQ9H1J5 351 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 ZNF576Q9H609 170 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 TRMT13Q9NUP7 481 aaKnown RBP16.66■□□□□ 0.26
MBD1-220ENST00000589758 PPP4R2Q9NY27 417 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 KIAA1217Q5T5P2 1943 aa16.66■□□□□ 0.26
MBD1-220ENST00000589758 PNMA6FA0A0J9YX94 578 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 PPP1R11O60927 126 aaPredicted RBP16.65■□□□□ 0.26
MBD1-220ENST00000589758 CYP2C9P11712 490 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 FOSL2P15408 326 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 ARHGAP1Q07960 439 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 RAB30Q15771 203 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 MAFAQ8NHW3 353 aaPredicted RBP16.65■□□□□ 0.26
MBD1-220ENST00000589758 AFG1LQ8WV93 481 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 EMID1Q96A84 441 aaPredicted RBP16.65■□□□□ 0.26
MBD1-220ENST00000589758 PIGSQ96S52 555 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 MAP3K14Q99558 947 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 PDCD2LQ9BRP1 358 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 PBX4Q9BYU1 374 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 MSRAQ9UJ68 235 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 DDX41Q9UJV9 622 aaKnown RBP16.65■□□□□ 0.26
MBD1-220ENST00000589758 RBM8AQ9Y5S9 174 aaKnown RBP16.65■□□□□ 0.26
MBD1-220ENST00000589758 MRVI1Q9Y6F6 885 aa16.65■□□□□ 0.26
MBD1-220ENST00000589758 GCOM1H8Y6P7 765 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms