RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 SEC63Q9UGP8 760 aaKnown RBP16.04■□□□□ 0.16
ERCC1-208ENST00000589165 BRPF3Q9ULD4 1205 aa16.04■□□□□ 0.16
ERCC1-208ENST00000589165 ZMYND8Q9ULU4 1186 aaPredicted RBP16.04■□□□□ 0.16
ERCC1-208ENST00000589165 ALPK3Q96L96 1907 aa16.04■□□□□ 0.16
ERCC1-208ENST00000589165 GCOM1H8Y6P7 765 aaPredicted RBP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 DYNC1LI2O43237 492 aaPredicted RBP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 POLR2MP0CAP2 368 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 PSMA5P28066 241 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 IRX5P78411 483 aaPredicted RBP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 STXBP2Q15833 593 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 FSCN1Q16658 493 aaKnown RBP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 GLT1D1Q96MS3 346 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 GDF15Q99988 308 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 USP26Q9BXU7 913 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 STARD7Q9NQZ5 370 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 PXMP2Q9NR77 195 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 RBM28Q9NW13 759 aaKnown RBP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 ATP11BQ9Y2G3 1177 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 LRRC37A2A6NM11 1700 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 TRIOBPQ9H2D6 2365 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 ZBTB43O43298 467 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 NR3C2P08235 984 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 SYN1P17600 705 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 HOXA13P31271 388 aaPredicted RBP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 ARHGEF16Q5VV41 709 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 BLOC1S2Q6QNY1 142 aa16.03■□□□□ 0.16
ERCC1-208ENST00000589165 CMTR1Q8N1G2 835 aaKnown RBP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 RBM27Q9P2N5 1060 aaKnown RBP16.03■□□□□ 0.16
ERCC1-208ENST00000589165 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.16
ERCC1-208ENST00000589165 ZEB2O60315 1214 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 EIF3JO75822 258 aaKnown RBP16.02■□□□□ 0.15
ERCC1-208ENST00000589165 CABYRO75952 493 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 RPS6KB1P23443 525 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 BMP8BP34820 402 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 BEX3Q00994 111 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 TLE2Q04725 743 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 TTLL4Q14679 1199 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 PPP2R5BQ15173 497 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 ANKRD33Q7Z3H0 272 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 RAB11FIP4Q86YS3 637 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 PIBF1Q8WXW3 757 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 TOX2Q96NM4 488 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 AGXT2Q9BYV1 514 aa16.02■□□□□ 0.15
ERCC1-208ENST00000589165 KLF18A0A0U1RQI7 1052 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 A0A1W2PPC1 479 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 PIK3CDO00329 1044 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 TXNP10599 105 aaKnown RBP16.01■□□□□ 0.15
ERCC1-208ENST00000589165 CPA1P15085 419 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 EIF2AK2P19525 551 aaKnown RBP16.01■□□□□ 0.15
ERCC1-208ENST00000589165 PTGS1P23219 599 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 CDK7P50613 346 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 FGD1P98174 961 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 RTN1Q16799 776 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 CCDC62Q6P9F0 684 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 PRKAG2Q9UGJ0 569 aa16.01■□□□□ 0.15
ERCC1-208ENST00000589165 A0A0U1RQG5 324 aaPredicted RBP16■□□□□ 0.15
ERCC1-208ENST00000589165 MAGEA10P43363 369 aaPredicted RBP16■□□□□ 0.15
ERCC1-208ENST00000589165 CPT1AP50416 773 aa16■□□□□ 0.15
ERCC1-208ENST00000589165 FUT2Q10981 343 aa16■□□□□ 0.15
ERCC1-208ENST00000589165 Q6ZUG5 572 aa16■□□□□ 0.15
ERCC1-208ENST00000589165 VSIG10LQ86VR7 867 aa16■□□□□ 0.15
ERCC1-208ENST00000589165 SEZ6LQ9BYH1 1024 aa16■□□□□ 0.15
ERCC1-208ENST00000589165 ZSWIM6Q9HCJ5 1215 aa16■□□□□ 0.15
ERCC1-208ENST00000589165 PDLIM7Q9NR12 457 aa16■□□□□ 0.15
ERCC1-208ENST00000589165 FAM217BQ9NTX9 383 aaPredicted RBP16■□□□□ 0.15
ERCC1-208ENST00000589165 FRMPD4Q14CM0 1322 aa16■□□□□ 0.15
ERCC1-208ENST00000589165 GOLGA8AA7E2F4 631 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 GOLGA8BA8MQT2 603 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 ARIH2O95376 493 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 CASTP20810 708 aaKnown RBP15.99■□□□□ 0.15
ERCC1-208ENST00000589165 EVCP57679 992 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 PGM5Q15124 567 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 CXCL17Q6UXB2 119 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 CCDC82Q8N4S0 544 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 SLC43A3Q8NBI5 491 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 BRF1Q92994 677 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 TM6SF1Q9BZW5 370 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 LAMA3Q16787 3333 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 MROH7Q68CQ1 1323 aa15.99■□□□□ 0.15
ERCC1-208ENST00000589165 CCDC196A0A1B0GTZ2 297 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 A6NJR5 290 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 ARVCFO00192 962 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 MEIS2O14770 477 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 PQBP1O60828 265 aaKnown RBP15.98■□□□□ 0.15
ERCC1-208ENST00000589165 CLTBP09497 229 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 BRDTQ58F21 947 aaPredicted RBP15.98■□□□□ 0.15
ERCC1-208ENST00000589165 SEPT14Q6ZU15 432 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 RUFY3Q7L099 469 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 TEX2Q8IWB9 1127 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 OR6J1Q8NGC5 347 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 CUL5Q93034 780 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 VTI1AQ96AJ9 217 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 POLR3EQ9NVU0 708 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 NID2Q14112 1375 aa15.98■□□□□ 0.15
ERCC1-208ENST00000589165 CNTNAP5Q8WYK1 1306 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms