RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TAF1P21675 1872 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 LAMB1P07942 1786 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 BICDL2A1A5D9 508 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 FAM196BA6NMK8 535 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 KCNJ18B7U540 433 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 STXBP3O00186 592 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 RASA1P20936 1047 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 EEF1GP26641 437 aaKnown RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 KCNJ12Q14500 433 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 INF2Q27J81 1249 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 CRY2Q49AN0 593 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 MFSD14BQ5SR56 506 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 MEX3CQ5U5Q3 659 aaKnown RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 PRR5LQ6MZQ0 368 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 CYP26C1Q6V0L0 522 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 CREBRFQ8IUR6 639 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 FAM114A1Q8IWE2 563 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 KRT222Q8N1A0 295 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 C4orf32Q8N8J7 132 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 CPLX3Q8WVH0 158 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 STAMQ92783 540 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 CALML4Q96GE6 196 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 NUP88Q99567 741 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 OCSTAMPQ9BR26 566 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 RTFDC1Q9BY42 306 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 SAP30BPQ9UHR5 308 aaKnown RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 SMCO2A6NFE2 343 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 M0R2N6 131 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 TEX33O43247 280 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 MFAP3LO75121 409 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 LGR5O75473 907 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 SERPINB2P05120 415 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 GPSM2P81274 684 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 NAA30Q147X3 362 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 KARSQ15046 597 aaKnown RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 KRT31Q15323 416 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 ERCC6LQ2NKX8 1250 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 ARHGAP29Q52LW3 1261 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 SLC27A3Q5K4L6 730 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 JAKMIP3Q5VZ66 844 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 LYPD8Q6UX82 237 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 PTF1AQ7RTS3 328 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 NEK8Q86SG6 692 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 SMYD4Q8IYR2 804 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 DHTKD1Q96HY7 919 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-206ENST00000589117 MED15Q96RN5 788 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 CRAMP1Q96RY5 1269 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 LRRC27Q9C0I9 530 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 THAP9Q9H5L6 903 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 FKBPLQ9UIM3 349 aa8.3□□□□□ -1.08
ZNF540-206ENST00000589117 WNT7AO00755 349 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 CCNT1O60563 726 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 OR52Z1P0C646 297 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 CASP1P29466 404 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 CASP14P31944 242 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 PBX1P40424 430 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 COPB1P53618 953 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 UBXN1Q04323 297 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 IL17AQ16552 155 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 TMEM266Q2M3C6 531 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 MORN1Q5T089 497 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 REXO1Q8N1G1 1221 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 GPR161Q8N6U8 529 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 KBTBD4Q9NVX7 518 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 MYO1AQ9UBC5 1043 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 V9GYY5 206 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 BTAF1O14981 1849 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 ESYT2A0FGR8 921 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 PES1O00541 588 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 ATP8B1O43520 1251 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 RHOBTB3O94955 611 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 FGFR1OPO95684 399 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 HOXA10P31260 410 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 CCT6AP40227 531 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 PRCPP42785 496 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 GOLGA8FQ08AF8 430 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 GOLGA8DPQ0D2H9 430 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 LETM2Q2VYF4 491 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 ASPRV1Q53RT3 343 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 TOGARAM2Q6ZUX3 1019 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 RASGRP2Q7LDG7 609 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 APTXQ7Z2E3 356 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 CABP7Q86V35 215 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 ADSSL1Q8N142 457 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 GIPC2Q8TF65 315 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 IQCDQ96DY2 449 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 NUP58Q9BVL2 599 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 VPS16Q9H269 839 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 EXOC1Q9NV70 894 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 ZNHIT6Q9NWK9 470 aaKnown RBP8.29□□□□□ -1.08
ZNF540-206ENST00000589117 PARP3Q9Y6F1 533 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 NHSQ6T4R5 1651 aa8.29□□□□□ -1.08
ZNF540-206ENST00000589117 KIAA1551Q9HCM1 1747 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 FLT1P17948 1338 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 A0A1W2PQC6 194 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CTAGE9A4FU28 777 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CYTH3O43739 400 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms