RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 MOXD1Q6UVY6 613 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 FAM114A1Q8IWE2 563 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 SNX29Q8TEQ0 813 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
MBD1-217ENST00000588937 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.1■□□□□ 0.33
MBD1-217ENST00000588937 PPP2R2CQ9Y2T4 447 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 MYH7BA7E2Y1 1941 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 SPDYE2BA6NHP3 402 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 NDUFB10O96000 172 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 GH2P01242 217 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 VIL1P09327 827 aaKnown RBP17.1■□□□□ 0.33
MBD1-217ENST00000588937 SPDYE6P0CI01 402 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 BMP3P12645 472 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 ETF1P62495 437 aaKnown RBP17.1■□□□□ 0.33
MBD1-217ENST00000588937 DLGAP5Q15398 846 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 SRCAPQ6ZRS2 3230 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 TEX2Q8IWB9 1127 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 LARGE2Q8N3Y3 721 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 VPS16Q9H269 839 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 ARHGEF10LQ9HCE6 1279 aa17.1■□□□□ 0.33
MBD1-217ENST00000588937 KDM3AQ9Y4C1 1321 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 MFAP3LO75121 409 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 IKQ13123 557 aaPredicted RBP17.09■□□□□ 0.33
MBD1-217ENST00000588937 TMEM119Q4V9L6 283 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 SYDE2Q5VT97 1194 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 TTI2Q6NXR4 508 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 BTNL9Q6UXG8 535 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 UNC13DQ70J99 1090 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 FBXO11Q86XK2 927 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 REXO1L1PQ8IX06 675 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 FAM151AQ8WW52 585 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 RAD54LQ92698 747 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 P2RX5Q93086 422 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 NT5C3AQ9H0P0 336 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 TAB2Q9NYJ8 693 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 PCDHA12Q9UN75 941 aa17.09■□□□□ 0.33
MBD1-217ENST00000588937 CYP3A7-CYP3A51PA0A087WV96 503 aa17.08■□□□□ 0.33
MBD1-217ENST00000588937 TRIM49BA6NDI0 452 aa17.08■□□□□ 0.33
MBD1-217ENST00000588937 COBLO75128 1261 aa17.08■□□□□ 0.33
MBD1-217ENST00000588937 FOSP01100 380 aaPredicted RBP17.08■□□□□ 0.33
MBD1-217ENST00000588937 CYP3A7P24462 503 aa17.08■□□□□ 0.33
MBD1-217ENST00000588937 SHROOM1Q2M3G4 852 aaPredicted RBP17.08■□□□□ 0.33
MBD1-217ENST00000588937 SYT10Q6XYQ8 523 aa17.08■□□□□ 0.33
MBD1-217ENST00000588937 CREBRFQ8IUR6 639 aa17.08■□□□□ 0.33
MBD1-217ENST00000588937 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.33
MBD1-217ENST00000588937 SRRTQ9BXP5 876 aaKnown RBP17.08■□□□□ 0.33
MBD1-217ENST00000588937 BLOC1S4Q9NUP1 217 aa17.08■□□□□ 0.33
MBD1-217ENST00000588937 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.32
MBD1-217ENST00000588937 POTEMA6NI47 508 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 UBXN1Q04323 297 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 PSMD2Q13200 908 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 FKBP1CQ5VVH2 108 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 CSGALNACT2Q8N6G5 542 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 HAS1Q92839 578 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 MBOAT7Q96N66 472 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 A0A1W2PQC6 194 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 TCP10L2B9ZVM9 353 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 PSMD14O00487 310 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 CCDC175P0C221 793 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 CASP14P31944 242 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 MCM6Q14566 821 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 HYIQ5T013 277 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 USP17L6PQ6QN14 398 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 GMLQ99445 158 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 ZNF70Q9UC06 446 aaPredicted RBP17.07■□□□□ 0.32
MBD1-217ENST00000588937 STK24Q9Y6E0 443 aa17.07■□□□□ 0.32
MBD1-217ENST00000588937 MYMKA6NI61 221 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 LGALS16A8MUM7 142 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 RAD17O75943 681 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 SLU7O95391 586 aaKnown RBP17.06■□□□□ 0.32
MBD1-217ENST00000588937 FGFR1OPO95684 399 aaKnown RBP17.06■□□□□ 0.32
MBD1-217ENST00000588937 GYPCP04921 128 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 FECHP22830 423 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 MMP14P50281 582 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 DNM2P50570 870 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
MBD1-217ENST00000588937 STK4Q13043 487 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 TMTC1Q8IUR5 882 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 CPLX3Q8WVH0 158 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 ERO1AQ96HE7 468 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 GOPCQ9HD26 462 aa17.06■□□□□ 0.32
MBD1-217ENST00000588937 BMP2KQ9NSY1 1161 aaPredicted RBP17.06■□□□□ 0.32
MBD1-217ENST00000588937 COL4A5P29400 1685 aa17.05■□□□□ 0.32
MBD1-217ENST00000588937 SPDYE3A6NKU9 549 aa17.05■□□□□ 0.32
MBD1-217ENST00000588937 MEIS2O14770 477 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms