RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 PCDHGA2Q9Y5H1 932 aa8.58□□□□□ -1.04
TPM4-210ENST00000588507 SEMA3EO15041 775 aa8.57□□□□□ -1.04
TPM4-210ENST00000588507 UPP2O95045 317 aa8.57□□□□□ -1.04
TPM4-210ENST00000588507 PLA2G2AP14555 144 aa8.57□□□□□ -1.04
TPM4-210ENST00000588507 ZDHHC14Q8IZN3 488 aa8.57□□□□□ -1.04
TPM4-210ENST00000588507 ATP8B4Q8TF62 1192 aa8.57□□□□□ -1.04
TPM4-210ENST00000588507 MTG1Q9BT17 334 aaPredicted RBP8.57□□□□□ -1.04
TPM4-210ENST00000588507 GPR108Q9NPR9 543 aa8.57□□□□□ -1.04
TPM4-210ENST00000588507 GPHNQ9NQX3 736 aaPredicted RBP8.57□□□□□ -1.04
TPM4-210ENST00000588507 RXFP3Q9NSD7 469 aa8.57□□□□□ -1.04
TPM4-210ENST00000588507 SIPA1L1O43166 1804 aa8.57□□□□□ -1.04
TPM4-210ENST00000588507 TENM4Q6N022 2769 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 ABCA12Q86UK0 2595 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 FSD2A1L4K1 749 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 LRP3O75074 770 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 LGR5O75473 907 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 NTRK1P04629 796 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 DCNP07585 359 aaKnown RBP8.56□□□□□ -1.04
TPM4-210ENST00000588507 LDHCP07864 332 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 MYL3P08590 195 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 PTGS1P23219 599 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 PLCD1P51178 756 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 PURAQ00577 322 aaKnown RBP8.56□□□□□ -1.04
TPM4-210ENST00000588507 PTGISQ16647 500 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 ATF7IPQ6VMQ6 1270 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 CCDC144CPQ8IYA2 1237 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 MAML2Q8IZL2 1156 aaPredicted RBP8.56□□□□□ -1.04
TPM4-210ENST00000588507 PLCD3Q8N3E9 789 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 LPIN2Q92539 896 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 IL17RAQ96F46 866 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 LSM14BQ9BX40 385 aaKnown RBP8.56□□□□□ -1.04
TPM4-210ENST00000588507 TLE6Q9H808 572 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 CABP5Q9NP86 173 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 ADAMTS8Q9UP79 889 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 PLAGL2Q9UPG8 496 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 GPSM3Q9Y4H4 160 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 RAI2Q9Y5P3 530 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 PIEZO2Q9H5I5 2752 aa8.56□□□□□ -1.04
TPM4-210ENST00000588507 MYO9AB2RTY4 2548 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 MCM3APO60318 1980 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 GDF9O60383 454 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 SRGAP2BP0DMP2 458 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
TPM4-210ENST00000588507 MECOMQ03112 1051 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 ABCB5Q2M3G0 1257 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 COL28A1Q2UY09 1125 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 IQSEC1Q6DN90 963 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 PRR23CQ6ZRP0 262 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 SPATA18Q8TC71 538 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 PPP1R13LQ8WUF5 828 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 DNAAF4Q8WXU2 420 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 MAP4K1Q92918 833 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 APOL5Q9BWW9 433 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 PLVAPQ9BX97 442 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 DLGAP2Q9P1A6 1054 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 FBXO4Q9UKT5 387 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 ADAMTS5Q9UNA0 930 aa8.55□□□□□ -1.04
TPM4-210ENST00000588507 POTEMA6NI47 508 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 TM4SF5O14894 197 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 FOXD2O60548 495 aaPredicted RBP8.54□□□□□ -1.04
TPM4-210ENST00000588507 LILRB5O75023 590 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 KCNK5O95279 499 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 HLA-DOAP06340 250 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 LINC00271P0C7V0 271 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 CKBP12277 381 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 SPINK2P20155 84 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 DNAJB1P25685 340 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 GSTO1P78417 241 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 RBM10P98175 930 aaKnown RBP8.54□□□□□ -1.04
TPM4-210ENST00000588507 RBL2Q08999 1139 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 FOXC1Q12948 553 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 TDGQ13569 410 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 ANKRD54Q6NXT1 300 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 POTEGQ6S5H5 508 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 ZNF605Q86T29 641 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 TDRD5Q8NAT2 981 aaKnown RBP8.54□□□□□ -1.04
TPM4-210ENST00000588507 ZBTB44Q8NCP5 570 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 DBF4BQ8NFT6 615 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 VN1R2Q8NFZ6 395 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 CLP1Q92989 425 aaKnown RBP8.54□□□□□ -1.04
TPM4-210ENST00000588507 P2RX5Q93086 422 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 NECTIN4Q96NY8 510 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 CDCA3Q99618 268 aaPredicted RBP8.54□□□□□ -1.04
TPM4-210ENST00000588507 SEMA4GQ9NTN9 838 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 ZSCAN32Q9NX65 697 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 RAB23Q9ULC3 237 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 PALD1Q9ULE6 856 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 DUSP12Q9UNI6 340 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 SIT1Q9Y3P8 196 aa8.54□□□□□ -1.04
TPM4-210ENST00000588507 E9PSI1 815 aa8.53□□□□□ -1.04
TPM4-210ENST00000588507 PER2O15055 1255 aa8.53□□□□□ -1.04
TPM4-210ENST00000588507 RETP07949 1114 aa8.53□□□□□ -1.04
TPM4-210ENST00000588507 NCLP19338 710 aaKnown RBP8.53□□□□□ -1.04
TPM4-210ENST00000588507 TECP42680 631 aa8.53□□□□□ -1.04
TPM4-210ENST00000588507 CPT1AP50416 773 aa8.53□□□□□ -1.04
TPM4-210ENST00000588507 LIMK1P53667 647 aa8.53□□□□□ -1.04
TPM4-210ENST00000588507 SRSF1Q07955 248 aaKnown RBP eCLIP8.53□□□□□ -1.042e-6■□□□□ 8.5
TPM4-210ENST00000588507 CSRP2Q16527 193 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms