RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 NOL8Q76FK4 1167 aaKnown RBP17.13■□□□□ 0.33
KDM4B-204ENST00000588166 CYB5R4Q7L1T6 521 aa17.13■□□□□ 0.33
KDM4B-204ENST00000588166 OTOP2Q7RTS6 562 aa17.13■□□□□ 0.33
KDM4B-204ENST00000588166 FBXO16Q8IX29 292 aaPredicted RBP17.13■□□□□ 0.33
KDM4B-204ENST00000588166 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
KDM4B-204ENST00000588166 SEZ6LQ9BYH1 1024 aa17.13■□□□□ 0.33
KDM4B-204ENST00000588166 PRR12Q9ULL5 1215 aa17.13■□□□□ 0.33
KDM4B-204ENST00000588166 TAF6LQ9Y6J9 622 aa17.13■□□□□ 0.33
KDM4B-204ENST00000588166 SCN10AQ9Y5Y9 1956 aa17.12■□□□□ 0.33
KDM4B-204ENST00000588166 ALAS1P13196 640 aa17.12■□□□□ 0.33
KDM4B-204ENST00000588166 PSMC6P62333 389 aa17.12■□□□□ 0.33
KDM4B-204ENST00000588166 MB21D2Q8IYB1 491 aaPredicted RBP17.12■□□□□ 0.33
KDM4B-204ENST00000588166 PNMA1Q8ND90 353 aa17.12■□□□□ 0.33
KDM4B-204ENST00000588166 CHMP4CQ96CF2 233 aa17.12■□□□□ 0.33
KDM4B-204ENST00000588166 SCN5AQ14524 2016 aa17.12■□□□□ 0.33
KDM4B-204ENST00000588166 PRRC2BQ5JSZ5 2229 aaKnown RBP17.11■□□□□ 0.33
KDM4B-204ENST00000588166 IFIT3O14879 490 aaKnown RBP17.11■□□□□ 0.33
KDM4B-204ENST00000588166 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
KDM4B-204ENST00000588166 PDHBP11177 359 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 RABGGTBP53611 331 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 KRT32Q14532 448 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 SEC23AQ15436 765 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 CCDC85BQ15834 202 aaPredicted RBP17.11■□□□□ 0.33
KDM4B-204ENST00000588166 EEPD1Q7L9B9 569 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 ADAMTS19Q8TE59 1207 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 AP5M1Q9H0R1 490 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 ALDH8A1Q9H2A2 487 aaPredicted RBP17.11■□□□□ 0.33
KDM4B-204ENST00000588166 MTIF3Q9H2K0 278 aaKnown RBP17.11■□□□□ 0.33
KDM4B-204ENST00000588166 SLC28A3Q9HAS3 691 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
KDM4B-204ENST00000588166 ZEB2O60315 1214 aa17.1■□□□□ 0.33
KDM4B-204ENST00000588166 EIF5BO60841 1220 aaKnown RBP17.1■□□□□ 0.33
KDM4B-204ENST00000588166 SNHG28P0DPA3 235 aa17.1■□□□□ 0.33
KDM4B-204ENST00000588166 MYOGP15173 224 aa17.1■□□□□ 0.33
KDM4B-204ENST00000588166 COL9A1P20849 921 aa17.1■□□□□ 0.33
KDM4B-204ENST00000588166 MCM5P33992 734 aa17.1■□□□□ 0.33
KDM4B-204ENST00000588166 MRPS5P82675 430 aaKnown RBP17.1■□□□□ 0.33
KDM4B-204ENST00000588166 WTAPQ15007 396 aa17.1■□□□□ 0.33
KDM4B-204ENST00000588166 DUSP28Q4G0W2 176 aa17.1■□□□□ 0.33
KDM4B-204ENST00000588166 GPATCH4Q5T3I0 446 aaKnown RBP17.1■□□□□ 0.33
KDM4B-204ENST00000588166 RANBP17Q9H2T7 1088 aaKnown RBP17.1■□□□□ 0.33
KDM4B-204ENST00000588166 ICAM1P05362 532 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 IGFBP4P22692 258 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 ZNF543Q08ER8 600 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 BTNL9Q6UXG8 535 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 SCLYQ96I15 445 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 TRMT13Q9NUP7 481 aaKnown RBP17.09■□□□□ 0.33
KDM4B-204ENST00000588166 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 PCDHA11Q9Y5I1 949 aa17.09■□□□□ 0.33
KDM4B-204ENST00000588166 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
KDM4B-204ENST00000588166 TCF20Q9UGU0 1960 aaKnown RBP17.09■□□□□ 0.33
KDM4B-204ENST00000588166 TANC1Q9C0D5 1861 aa17.08■□□□□ 0.33
KDM4B-204ENST00000588166 RBM47A0AV96 593 aaKnown RBP17.08■□□□□ 0.32
KDM4B-204ENST00000588166 PRC1O43663 620 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 PURAQ00577 322 aaKnown RBP17.08■□□□□ 0.32
KDM4B-204ENST00000588166 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 ASPRV1Q53RT3 343 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 SYDE2Q5VT97 1194 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 TTBK2Q6IQ55 1244 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 NSMFQ6X4W1 530 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.32
KDM4B-204ENST00000588166 TMEM87BQ96K49 555 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 NEK1Q96PY6 1258 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 SLC4A7Q9Y6M7 1214 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 TET1Q8NFU7 2136 aa17.08■□□□□ 0.32
KDM4B-204ENST00000588166 WDR19Q8NEZ3 1342 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 NFIBO00712 420 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 PARP1P09874 1014 aaKnown RBP17.07■□□□□ 0.32
KDM4B-204ENST00000588166 CYP2C9P11712 490 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 HSPA4P34932 840 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 ALDH5A1P51649 535 aaPredicted RBP17.07■□□□□ 0.32
KDM4B-204ENST00000588166 ANTXR2P58335 489 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 BAATQ14032 418 aaPredicted RBP17.07■□□□□ 0.32
KDM4B-204ENST00000588166 PPP2R2DQ66LE6 453 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 CHST3Q7LGC8 479 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 UHRF1Q96T88 793 aaPredicted RBP17.07■□□□□ 0.32
KDM4B-204ENST00000588166 RAPGEFL1Q9UHV5 662 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
KDM4B-204ENST00000588166 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 PFKMP08237 780 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
KDM4B-204ENST00000588166 ATP2A2P16615 1042 aaKnown RBP17.06■□□□□ 0.32
KDM4B-204ENST00000588166 SLC16A2P36021 539 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
KDM4B-204ENST00000588166 CATIPQ7Z7H3 387 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 RASEFQ8IZ41 740 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 IGDCC4Q8TDY8 1250 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 CLEC4DQ8WXI8 215 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 KCNB2Q92953 911 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 WDR11Q9BZH6 1224 aa17.06■□□□□ 0.32
KDM4B-204ENST00000588166 BMP1P13497 986 aa17.05■□□□□ 0.32
KDM4B-204ENST00000588166 POU3F3P20264 500 aaPredicted RBP17.05■□□□□ 0.32
KDM4B-204ENST00000588166 SLC30A10Q6XR72 485 aa17.05■□□□□ 0.32
KDM4B-204ENST00000588166 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
KDM4B-204ENST00000588166 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms