RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 NR1D1P20393 614 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 MRPS25P82663 173 aaKnown RBP18.23■□□□□ 0.51
RANBP3-209ENST00000587411 STK4Q13043 487 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 PLCB4Q15147 1175 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 CCDC152Q4G0S7 254 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 NHSL1Q5SYE7 1610 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 ARHGAP27Q6ZUM4 889 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 CABP7Q86V35 215 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 DZIP3Q86Y13 1208 aaKnown RBP18.23■□□□□ 0.51
RANBP3-209ENST00000587411 GPATCH11Q8N954 259 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 WHAMMQ8TF30 809 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 PSMB7Q99436 277 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 NDST4Q9H3R1 872 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 SMARCAL1Q9NZC9 954 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 SSU72P8A0A1W2PR75 194 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 GRID2IPA4D2P6 1211 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 PLCG1P19174 1290 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 PTGISQ16647 500 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 MAN2A1Q16706 1144 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 KCTD16Q68DU8 428 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 EEF2KMTQ96G04 330 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 PLIN2Q99541 437 aa18.23■□□□□ 0.51
RANBP3-209ENST00000587411 CICQ96RK0 1608 aaPredicted RBP18.22■□□□□ 0.51
RANBP3-209ENST00000587411 FLT1P17948 1338 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 DYNLL1P63167 89 aaKnown RBP18.22■□□□□ 0.51
RANBP3-209ENST00000587411 KLHDC7AQ5VTJ3 777 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 ZNF473Q8WTR7 871 aaKnown RBP18.22■□□□□ 0.51
RANBP3-209ENST00000587411 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.22■□□□□ 0.515e-12■■■■■ 104.3
RANBP3-209ENST00000587411 FAM207AQ9NSI2 230 aaPredicted RBP18.22■□□□□ 0.51
RANBP3-209ENST00000587411 EHD2Q9NZN4 543 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 ZBTB1Q9Y2K1 713 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 USP17L12C9JPN9 530 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 USP17L21D6R901 530 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 NCK2O43639 380 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 HEXIM1O94992 359 aaKnown RBP18.22■□□□□ 0.51
RANBP3-209ENST00000587411 ATP6V1AP38606 617 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 DRP2Q13474 957 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 LRRC15Q8TF66 581 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 ATP6V1G3Q96LB4 118 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 CXorf56Q9H5V9 222 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 NFU1Q9UMS0 254 aa18.22■□□□□ 0.51
RANBP3-209ENST00000587411 LRRC53A6NM62 1247 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 GLI1P08151 1106 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 CARSP49589 748 aaKnown RBP18.21■□□□□ 0.51
RANBP3-209ENST00000587411 ASTE1Q2TB18 679 aaPredicted RBP18.21■□□□□ 0.51
RANBP3-209ENST00000587411 RRAGAQ7L523 313 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 RASGRP4Q8TDF6 673 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 MMRN2Q9H8L6 949 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 EPB41L5Q9HCM4 733 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 LUC7LQ9NQ29 371 aaKnown RBP18.21■□□□□ 0.51
RANBP3-209ENST00000587411 PCDHA6Q9UN73 950 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 PCDHA8Q9Y5H6 950 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 NMT2O60551 498 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 IL6STP40189 918 aaPredicted RBP18.21■□□□□ 0.51
RANBP3-209ENST00000587411 MDH1P40925 334 aaKnown RBP18.21■□□□□ 0.51
RANBP3-209ENST00000587411 CHRNDQ07001 517 aa18.21■□□□□ 0.51
RANBP3-209ENST00000587411 RBAK-RBAKDNI3L0D1 243 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 MYO1FO00160 1098 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 EPHB6O15197 1021 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 HOXA7P31268 230 aaPredicted RBP18.2■□□□□ 0.5
RANBP3-209ENST00000587411 GNAQP50148 359 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 GUCY2DQ02846 1103 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 NLRP14Q86W24 1093 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 ARFGAP2Q8N6H7 521 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 PIK3R5Q8WYR1 880 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 GPKOWQ92917 476 aaPredicted RBP eCLIP18.2■□□□□ 0.5
RANBP3-209ENST00000587411 MTMR8Q96EF0 704 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 SEMA6BQ9H3T3 888 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 SALL4Q9UJQ4 1053 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 NUP98P52948 1817 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 FAM107AO95990 144 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 FCER1AP12319 257 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 GUCY1A3Q02108 690 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 INF2Q27J81 1249 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 PPP4R3AQ6IN85 833 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 PDXDC1Q6P996 788 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 EIF1ADQ8N9N8 165 aaKnown RBP18.2■□□□□ 0.5
RANBP3-209ENST00000587411 MYCBPAPQ8TBZ2 947 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 BAP1Q92560 729 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 NUCKS1Q9H1E3 243 aaKnown RBP18.2■□□□□ 0.5
RANBP3-209ENST00000587411 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
RANBP3-209ENST00000587411 FAM153BP0C7A2 387 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 NT5C2P49902 561 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 SMTNP53814 917 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 FAM153CQ494X1 144 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 FAM47AQ5JRC9 791 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 C3orf20Q8ND61 904 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 IFT81Q8WYA0 676 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 CCT8L2Q96SF2 557 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 FAM153AQ9UHL3 310 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.19■□□□□ 0.5
RANBP3-209ENST00000587411 CHUKO15111 745 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 RASSF7Q02833 373 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 ACTN3Q08043 901 aaPredicted RBP18.19■□□□□ 0.5
RANBP3-209ENST00000587411 SUSD4Q5VX71 490 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 LRIG3Q6UXM1 1119 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 CADPS2Q86UW7 1296 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 KIAA0895Q8NCT3 520 aa18.19■□□□□ 0.5
RANBP3-209ENST00000587411 CACNA1SQ13698 1873 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms