RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 GRIN2DO15399 1336 aa15.33■□□□□ 0.04
H3F3B-205ENST00000587171 UNC80Q8N2C7 3258 aa15.33■□□□□ 0.04
H3F3B-205ENST00000587171 TLR3O15455 904 aaKnown RBP15.32■□□□□ 0.04
H3F3B-205ENST00000587171 CPT1AP50416 773 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 HSD17B4P51659 736 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 EPHB4P54760 987 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 FPGSQ05932 587 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 Q7L0L9 218 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 RMDN3Q96TC7 470 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 MTA3Q9BTC8 594 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 MYH7BA7E2Y1 1941 aa15.32■□□□□ 0.04
H3F3B-205ENST00000587171 CYTH3O43739 400 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 ARIH2O95376 493 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 CFBP00751 764 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 TXNP10599 105 aaKnown RBP15.31■□□□□ 0.04
H3F3B-205ENST00000587171 PURAQ00577 322 aaKnown RBP15.31■□□□□ 0.04
H3F3B-205ENST00000587171 TTLL4Q14679 1199 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 FAM109BQ6ICB4 259 aaPredicted RBP15.31■□□□□ 0.04
H3F3B-205ENST00000587171 MFSD5Q6N075 450 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 CATIPQ7Z7H3 387 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 HOMER1Q86YM7 354 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 OR6J1Q8NGC5 347 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 PIGSQ96S52 555 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 MAP3K20Q9NYL2 800 aaKnown RBP15.31■□□□□ 0.04
H3F3B-205ENST00000587171 PCDHA1Q9Y5I3 950 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 PRUNE2Q8WUY3 3088 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 MYO9BQ13459 2157 aa15.31■□□□□ 0.04
H3F3B-205ENST00000587171 A6NJR5 290 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 SLC27A2O14975 620 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 DDAH1O94760 285 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 PSMC6P62333 389 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 TRAF1Q13077 416 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 COL9A3Q14050 684 aaPredicted RBP15.3■□□□□ 0.04
H3F3B-205ENST00000587171 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 STXBP2Q15833 593 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 BRDTQ58F21 947 aaPredicted RBP15.3■□□□□ 0.04
H3F3B-205ENST00000587171 CCDC62Q6P9F0 684 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 CASC1Q6TDU7 716 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 SAMD3Q8N6K7 520 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 COPS5Q92905 334 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 MAP3K14Q99558 947 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 ANO2Q9NQ90 1003 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 GPHNQ9NQX3 736 aaPredicted RBP15.3■□□□□ 0.04
H3F3B-205ENST00000587171 PXMP2Q9NR77 195 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 MTMR10Q9NXD2 777 aa15.3■□□□□ 0.04
H3F3B-205ENST00000587171 PNMA6FA0A0J9YX94 578 aa15.29■□□□□ 0.04
H3F3B-205ENST00000587171 PRC1O43663 620 aa15.29■□□□□ 0.04
H3F3B-205ENST00000587171 NR3C2P08235 984 aa15.29■□□□□ 0.04
H3F3B-205ENST00000587171 EIF2AK2P19525 551 aaKnown RBP15.29■□□□□ 0.04
H3F3B-205ENST00000587171 MCM5P33992 734 aa15.29■□□□□ 0.04
H3F3B-205ENST00000587171 ARHGEF16Q5VV41 709 aa15.29■□□□□ 0.04
H3F3B-205ENST00000587171 CREB3L3Q68CJ9 461 aa15.29■□□□□ 0.04
H3F3B-205ENST00000587171 ZNF654Q8IZM8 581 aa15.29■□□□□ 0.04
H3F3B-205ENST00000587171 RNPC3Q96LT9 517 aaKnown RBP15.29■□□□□ 0.04
H3F3B-205ENST00000587171 PPP1R12CQ9BZL4 782 aa15.29■□□□□ 0.04
H3F3B-205ENST00000587171 CHD9Q3L8U1 2897 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 SH2B2O14492 632 aaPredicted RBP15.28■□□□□ 0.04
H3F3B-205ENST00000587171 B4GALT4O60513 344 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 KPNA6O60684 536 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 MYL3P08590 195 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
H3F3B-205ENST00000587171 PPIGQ13427 754 aaKnown RBP eCLIP15.28■□□□□ 0.042e-17■□□□□ 8.1
H3F3B-205ENST00000587171 SEPT14Q6ZU15 432 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 TMEM199Q8N511 208 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 TMEM87BQ96K49 555 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 PDCD2LQ9BRP1 358 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 MTG1Q9BT17 334 aaPredicted RBP15.28■□□□□ 0.04
H3F3B-205ENST00000587171 MYL10Q9BUA6 226 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 SPZ1Q9BXG8 430 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 TRPV6Q9H1D0 765 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 ALDH8A1Q9H2A2 487 aaPredicted RBP15.28■□□□□ 0.04
H3F3B-205ENST00000587171 CUL9Q8IWT3 2517 aa15.28■□□□□ 0.04
H3F3B-205ENST00000587171 EIF3JO75822 258 aaKnown RBP15.27■□□□□ 0.04
H3F3B-205ENST00000587171 GH1P01241 217 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 CSF2RAP15509 400 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 SMARCA1P28370 1054 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 HOXA13P31271 388 aaPredicted RBP15.27■□□□□ 0.04
H3F3B-205ENST00000587171 KIF5BP33176 963 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 CYP2C18P33260 490 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 LIFRP42702 1097 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 LY6KQ17RY6 165 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 C16orf59Q7L2K0 433 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 CTCFLQ8NI51 663 aaPredicted RBP15.27■□□□□ 0.04
H3F3B-205ENST00000587171 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.27■□□□□ 0.046e-23■□□□□ 9.8
H3F3B-205ENST00000587171 NOC4LQ9BVI4 516 aaKnown RBP15.27■□□□□ 0.04
H3F3B-205ENST00000587171 HIPK3Q9H422 1215 aa15.27■□□□□ 0.04
H3F3B-205ENST00000587171 TRIP12Q14669 1992 aaPredicted RBP15.27■□□□□ 0.03
H3F3B-205ENST00000587171 UMODL1Q5DID0 1318 aa15.26■□□□□ 0.03
H3F3B-205ENST00000587171 CHD7Q9P2D1 2997 aa15.26■□□□□ 0.03
H3F3B-205ENST00000587171 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
H3F3B-205ENST00000587171 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
H3F3B-205ENST00000587171 NBPF20Q3BBV1 942 aa15.26■□□□□ 0.03
H3F3B-205ENST00000587171 TMEM240Q5SV17 173 aa15.26■□□□□ 0.03
H3F3B-205ENST00000587171 NFRKBQ6P4R8 1299 aa15.26■□□□□ 0.03
H3F3B-205ENST00000587171 AFG1LQ8WV93 481 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms