RNA–Protein interactions for RNA: ENST00000586607.5

H3F3B-204, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 4 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-204ENST00000586607 C22orf23Q9BZE7 217 aa11.28□□□□□ -0.6
H3F3B-204ENST00000586607 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
H3F3B-204ENST00000586607 MYH6P13533 1939 aa11.28□□□□□ -0.6
H3F3B-204ENST00000586607 STXBP3O00186 592 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 NKRFO15226 690 aaKnown RBP eCLIP11.27□□□□□ -0.613e-7■■□□□ 11.7
H3F3B-204ENST00000586607 PFKFB2O60825 505 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 EIF3JO75822 258 aaKnown RBP11.27□□□□□ -0.61
H3F3B-204ENST00000586607 STAM2O75886 525 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 NR3C2P08235 984 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 SCG2P13521 617 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 NEK4P51957 841 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 GJA9P57773 515 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 PDE4DQ08499 809 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 STXBP2Q15833 593 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 PKN1Q16512 942 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 ARHGEF16Q5VV41 709 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 WWC2Q6AWC2 1192 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 MCTP2Q6DN12 878 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.61
H3F3B-204ENST00000586607 RNF180Q86T96 592 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 VSIG10LQ86VR7 867 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 CUL5Q93034 780 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 PSTPIP2Q9H939 334 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 UPF2Q9HAU5 1272 aaKnown RBP11.27□□□□□ -0.61
H3F3B-204ENST00000586607 XPNPEP3Q9NQH7 507 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 TPCN1Q9ULQ1 816 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
H3F3B-204ENST00000586607 FRMPD3Q5JV73 1810 aa11.27□□□□□ -0.61
H3F3B-204ENST00000586607 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
H3F3B-204ENST00000586607 hCG_1642624A0A1W2PR95 340 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 ADCY6O43306 1168 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 CDKL5O76039 1030 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 HOXA13P31271 388 aaPredicted RBP11.26□□□□□ -0.61
H3F3B-204ENST00000586607 TNFAIP2Q03169 654 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 SCRN1Q12765 414 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 PGM5Q15124 567 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 LRRC41Q15345 812 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 DUSP28Q4G0W2 176 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 CCSAPQ6IQ19 270 aaPredicted RBP11.26□□□□□ -0.61
H3F3B-204ENST00000586607 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 HEATR3Q7Z4Q2 680 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 FBXO16Q8IX29 292 aaPredicted RBP11.26□□□□□ -0.61
H3F3B-204ENST00000586607 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
H3F3B-204ENST00000586607 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 PAWRQ96IZ0 340 aaKnown RBP11.26□□□□□ -0.61
H3F3B-204ENST00000586607 HTATIP2Q9BUP3 242 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 ZMYND12Q9H0C1 365 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 C11orf49Q9H6J7 331 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 NCOA5Q9HCD5 579 aaKnown RBP11.26□□□□□ -0.61
H3F3B-204ENST00000586607 RIC8AQ9NPQ8 531 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 SH3GLB2Q9NR46 395 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 PHF24Q9UPV7 400 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 TNRC18O15417 2968 aaPredicted RBP11.26□□□□□ -0.61
H3F3B-204ENST00000586607 STK36Q9NRP7 1315 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
H3F3B-204ENST00000586607 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 CPLX1O14810 134 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 DEXIO95424 95 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
H3F3B-204ENST00000586607 TGFB3P10600 412 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 SMPD1P17405 629 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 EIF2AK2P19525 551 aaKnown RBP11.25□□□□□ -0.61
H3F3B-204ENST00000586607 CCND2P30279 289 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 CLK2P49760 499 aaKnown RBP11.25□□□□□ -0.61
H3F3B-204ENST00000586607 NAPAP54920 295 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
H3F3B-204ENST00000586607 AKAP17AQ02040 695 aaKnown RBP11.25□□□□□ -0.61
H3F3B-204ENST00000586607 AP3B2Q13367 1082 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 RABEP1Q15276 862 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 USP17L6PQ6QN14 398 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 TRIM22Q8IYM9 498 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 SMARCC2Q8TAQ2 1214 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.615e-14■□□□□ 8.4
H3F3B-204ENST00000586607 PHKBQ93100 1093 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 BACH2Q9BYV9 841 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 WDR11Q9BZH6 1224 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 SLKQ9H2G2 1235 aaPredicted RBP11.25□□□□□ -0.61
H3F3B-204ENST00000586607 PDGFCQ9NRA1 345 aa11.25□□□□□ -0.61
H3F3B-204ENST00000586607 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.24□□□□□ -0.61
H3F3B-204ENST00000586607 KBTBD13C9JR72 458 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 CTAGE5O15320 804 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 GNA11P29992 359 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 ICAM3P32942 547 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 ADCY7P51828 1080 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
H3F3B-204ENST00000586607 TTLL4Q14679 1199 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 SNX17Q15036 470 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 ME3Q16798 604 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 ANO1Q5XXA6 986 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 PCNX4Q63HM2 1172 aa11.24□□□□□ -0.61
H3F3B-204ENST00000586607 EEPD1Q7L9B9 569 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms