RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 GRB10Q13322 594 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 KRT79Q5XKE5 535 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 MED15Q96RN5 788 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 PPP2R3BQ9Y5P8 575 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 SMCHD1A6NHR9 2005 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 ABCB11O95342 1321 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 POTEMA6NI47 508 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 AMPD3Q01432 767 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 CCDC144BQ3MJ40 725 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 Q4G0T1 1027 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 TRMT44Q8IYL2 757 aaKnown RBP25.05■■□□□ 1.6
CIRBP-208ENST00000586548 SLFN12Q8IYM2 578 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 CDK5RAP3Q96JB5 506 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 FBXO28Q9NVF7 368 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 IMPACTQ9P2X3 320 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 PCDHA12Q9UN75 941 aa25.05■■□□□ 1.6
CIRBP-208ENST00000586548 SLC26A4O43511 780 aa25.04■■□□□ 1.6
CIRBP-208ENST00000586548 SERPINC1P01008 464 aa25.04■■□□□ 1.6
CIRBP-208ENST00000586548 INPP5BP32019 993 aa25.04■■□□□ 1.6
CIRBP-208ENST00000586548 CIITAP33076 1130 aa25.04■■□□□ 1.6
CIRBP-208ENST00000586548 SPATA1Q5VX52 437 aa25.04■■□□□ 1.6
CIRBP-208ENST00000586548 SMYD4Q8IYR2 804 aaPredicted RBP25.04■■□□□ 1.6
CIRBP-208ENST00000586548 SNX29Q8TEQ0 813 aa25.04■■□□□ 1.6
CIRBP-208ENST00000586548 PNMA5Q96PV4 448 aa25.04■■□□□ 1.6
CIRBP-208ENST00000586548 C7orf25Q9BPX7 421 aa25.04■■□□□ 1.6
CIRBP-208ENST00000586548 TBX3O15119 743 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 KLRC4O43908 158 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 CYP3A4P08684 503 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 HOXA13P31271 388 aaPredicted RBP25.03■■□□□ 1.6
CIRBP-208ENST00000586548 UBASH3AP57075 661 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 SCYL3Q8IZE3 742 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 USP14P54578 494 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 TMEM119Q4V9L6 283 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 KLHL10Q6JEL2 608 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 PRPF38AQ8NAV1 312 aaKnown RBP25.03■■□□□ 1.6
CIRBP-208ENST00000586548 SLF1Q9BQI6 1058 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 TRIM9Q9C026 710 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 GGA3Q9NZ52 723 aa25.03■■□□□ 1.6
CIRBP-208ENST00000586548 GCOM1H8Y6P7 765 aaPredicted RBP25.02■■□□□ 1.6
CIRBP-208ENST00000586548 RHOBTB3O94955 611 aa25.02■■□□□ 1.6
CIRBP-208ENST00000586548 POLR2MP0CAP2 368 aa25.02■■□□□ 1.6
CIRBP-208ENST00000586548 KMT5BQ4FZB7 885 aa25.02■■□□□ 1.6
CIRBP-208ENST00000586548 LDHDQ86WU2 507 aa25.02■■□□□ 1.6
CIRBP-208ENST00000586548 CCDC47Q96A33 483 aaKnown RBP25.02■■□□□ 1.6
CIRBP-208ENST00000586548 WDR18Q9BV38 432 aa25.02■■□□□ 1.6
CIRBP-208ENST00000586548 BLOC1S4Q9NUP1 217 aa25.02■■□□□ 1.6
CIRBP-208ENST00000586548 EPS15P42566 896 aa25.01■■□□□ 1.59
CIRBP-208ENST00000586548 GSDMDP57764 484 aa25.01■■□□□ 1.59
CIRBP-208ENST00000586548 SV2BQ7L1I2 683 aa25.01■■□□□ 1.59
CIRBP-208ENST00000586548 ETNPPLQ8TBG4 499 aa25.01■■□□□ 1.59
CIRBP-208ENST00000586548 GTPBP4Q9BZE4 634 aaKnown RBP25.01■■□□□ 1.59
CIRBP-208ENST00000586548 AS3MTQ9HBK9 375 aa25.01■■□□□ 1.59
CIRBP-208ENST00000586548 RWDD2AQ9UIY3 292 aa25.01■■□□□ 1.59
CIRBP-208ENST00000586548 KDM3AQ9Y4C1 1321 aa25.01■■□□□ 1.59
CIRBP-208ENST00000586548 CFBP00751 764 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 ICAM1P05362 532 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 HYIQ5T013 277 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 LARP4BQ92615 738 aaKnown RBP25■■□□□ 1.59
CIRBP-208ENST00000586548 LENG9Q96B70 501 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 EHMT1Q9H9B1 1298 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 CTNND2Q9UQB3 1225 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 CDK11BP21127 795 aaKnown RBP25■■□□□ 1.59
CIRBP-208ENST00000586548 PAK1Q13153 545 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 DHX8Q14562 1220 aaKnown RBP25■■□□□ 1.59
CIRBP-208ENST00000586548 PRR16Q569H4 304 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 SAMD1Q6SPF0 538 aaPredicted RBP25■■□□□ 1.59
CIRBP-208ENST00000586548 FILIP1Q7Z7B0 1213 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 RAD54LQ92698 747 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 FAM20AQ96MK3 541 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 WRNIP1Q96S55 665 aa25■■□□□ 1.59
CIRBP-208ENST00000586548 SAMSN1Q9NSI8 373 aaKnown RBP25■■□□□ 1.59
CIRBP-208ENST00000586548 PITPNM2Q9BZ72 1349 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 HIRAP54198 1017 aaPredicted RBP24.99■■□□□ 1.59
CIRBP-208ENST00000586548 STX17P56962 302 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 MTMR2Q13614 643 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 TMC6Q7Z403 805 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 FCHSD1Q86WN1 690 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 CACTINQ8WUQ7 758 aaKnown RBP24.99■■□□□ 1.59
CIRBP-208ENST00000586548 GJA10Q969M2 543 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 NUDT12Q9BQG2 462 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 LRRC27Q9C0I9 530 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 NT5C3AQ9H0P0 336 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 GDAQ9Y2T3 454 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 ZNF536O15090 1300 aa24.99■■□□□ 1.59
CIRBP-208ENST00000586548 FAM86B1E9PN63 330 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 FAM86B2P0C5J1 330 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 ASIC1P78348 528 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 LRRC8AQ8IWT6 810 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 GIMAP8Q8ND71 665 aaPredicted RBP24.98■■□□□ 1.59
CIRBP-208ENST00000586548 KIAA1524Q8TCG1 905 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 PICK1Q9NRD5 415 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 EMILIN3Q9NT22 766 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 CCPG1Q9ULG6 757 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 PYCARDQ9ULZ3 195 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 VCAM1P19320 739 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 PRCPP42785 496 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 CDKAL1Q5VV42 579 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 ADSSL1Q8N142 457 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 NELFBQ8WX92 580 aa24.98■■□□□ 1.59
CIRBP-208ENST00000586548 TBC1D5Q92609 795 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms