RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 CCT2P78371 535 aaKnown RBP13.38□□□□□ -0.27
LRFN3-202ENST00000585876 SCRN1Q12765 414 aa13.38□□□□□ -0.27
LRFN3-202ENST00000585876 ACVR2BQ13705 512 aa13.38□□□□□ -0.27
LRFN3-202ENST00000585876 HEATR3Q7Z4Q2 680 aa13.38□□□□□ -0.27
LRFN3-202ENST00000585876 GPKOWQ92917 476 aaPredicted RBP eCLIP13.38□□□□□ -0.27
LRFN3-202ENST00000585876 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
LRFN3-202ENST00000585876 RMDN3Q96TC7 470 aa13.38□□□□□ -0.27
LRFN3-202ENST00000585876 PXMP2Q9NR77 195 aa13.38□□□□□ -0.27
LRFN3-202ENST00000585876 RBM47A0AV96 593 aaKnown RBP13.37□□□□□ -0.27
LRFN3-202ENST00000585876 CDKL5O76039 1030 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 EN2P19622 333 aaPredicted RBP13.37□□□□□ -0.27
LRFN3-202ENST00000585876 HOXA13P31271 388 aaPredicted RBP13.37□□□□□ -0.27
LRFN3-202ENST00000585876 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
LRFN3-202ENST00000585876 NKX3-2P78367 333 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 ME3Q16798 604 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 PRAMEF19Q5SWL8 479 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 TAPT1Q6NXT6 567 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
LRFN3-202ENST00000585876 PHKBQ93100 1093 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 TAAR1Q96RJ0 339 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
LRFN3-202ENST00000585876 GLT8D2Q9H1C3 349 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
LRFN3-202ENST00000585876 PSTPIP2Q9H939 334 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 DOCK5Q9H7D0 1870 aa13.37□□□□□ -0.27
LRFN3-202ENST00000585876 CPLX1O14810 134 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 ADCY6O43306 1168 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 LARGE1O95461 756 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 NAPAP54920 295 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 CCDC144BQ3MJ40 725 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 CCDC12Q8WUD4 166 aaPredicted RBP13.36□□□□□ -0.27
LRFN3-202ENST00000585876 CUL5Q93034 780 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 PDCD2LQ9BRP1 358 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 ZMYND12Q9H0C1 365 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 RIC8AQ9NPQ8 531 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 SH3GLB2Q9NR46 395 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 ZHX1Q9UKY1 873 aaPredicted RBP13.36□□□□□ -0.27
LRFN3-202ENST00000585876 FAM184BQ9ULE4 1060 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 LIMCH1Q9UPQ0 1083 aa13.36□□□□□ -0.27
LRFN3-202ENST00000585876 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
LRFN3-202ENST00000585876 CAPN15O75808 1086 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 DEXIO95424 95 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 CTDNEP1O95476 244 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 RARBP10826 455 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 CNGA1P29973 690 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 CLK2P49760 499 aaKnown RBP13.35□□□□□ -0.27
LRFN3-202ENST00000585876 PDE4DQ08499 809 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 STK3Q13188 491 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 PGM5Q15124 567 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 ARHGEF16Q5VV41 709 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 USP17L6PQ6QN14 398 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 FBXO16Q8IX29 292 aaPredicted RBP13.35□□□□□ -0.27
LRFN3-202ENST00000585876 SLC26A6Q9BXS9 759 aa13.35□□□□□ -0.27
LRFN3-202ENST00000585876 UPF3AQ9H1J1 476 aaKnown RBP13.35□□□□□ -0.27
LRFN3-202ENST00000585876 DDX49Q9Y6V7 483 aaKnown RBP13.35□□□□□ -0.27
LRFN3-202ENST00000585876 SCN10AQ9Y5Y9 1956 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 DNM1LO00429 736 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 ST18O60284 1047 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 ADAMTS4O75173 837 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 STAM2O75886 525 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 FARP2O94887 1054 aaPredicted RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 NR3C2P08235 984 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 COL6A1P12109 1028 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 EIF2AK2P19525 551 aaKnown RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 CST5P28325 142 aaPredicted RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 ADCY7P51828 1080 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 AKAP17AQ02040 695 aaKnown RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 SSRP1Q08945 709 aaKnown RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 ST3GAL1Q11201 340 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 STXBP2Q15833 593 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 VSIG10LQ86VR7 867 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 CCDC148Q8NFR7 591 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 IL31RAQ8NI17 732 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 SMARCC2Q8TAQ2 1214 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 SCFD2Q8WU76 684 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 SH2B1Q9NRF2 756 aaPredicted RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
LRFN3-202ENST00000585876 Q9Y3F1 56 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 SYNRGQ9UMZ2 1314 aa13.34□□□□□ -0.27
LRFN3-202ENST00000585876 FOSP01100 380 aaPredicted RBP13.33□□□□□ -0.28
LRFN3-202ENST00000585876 TFRCP02786 760 aaKnown RBP13.33□□□□□ -0.28
LRFN3-202ENST00000585876 ADCYAP1R1P41586 468 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 GJA9P57773 515 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 AP3B2Q13367 1082 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 PCNX4Q63HM2 1172 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 MCTP2Q6DN12 878 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 CCDC62Q6P9F0 684 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 NSUN7Q8NE18 718 aaKnown RBP13.33□□□□□ -0.28
LRFN3-202ENST00000585876 INPP4AQ96PE3 977 aaPredicted RBP13.33□□□□□ -0.28
LRFN3-202ENST00000585876 XPNPEP3Q9NQH7 507 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 PDGFCQ9NRA1 345 aa13.33□□□□□ -0.28
LRFN3-202ENST00000585876 WDR81Q562E7 1941 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms