RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 USP8P40818 1118 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 TCP11X2Q5H9J9 407 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 CIAPIN1Q6FI81 312 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 POTEGQ6S5H5 508 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 POTEEQ6S8J3 1075 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 RTKN2Q8IZC4 609 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 MYOCDQ8IZQ8 938 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 NEK11Q8NG66 645 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 SMCR8Q8TEV9 937 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 PSMB7Q99436 277 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 FBXO28Q9NVF7 368 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 GAKO14976 1311 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 GLI3P10071 1580 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 PSDA5PKW4 1024 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 GCNT3O95395 438 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 CYLC1P35663 651 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 ARHGAP4P98171 946 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 DACT2Q5SW24 774 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 PIGOQ8TEQ8 1089 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 UBR2Q8IWV8 1755 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 NPHP3-ACAD11A0A0J9YXS1 232 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 PPP1R3GB7ZBB8 358 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 GCOM1H8Y6P7 765 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 POLR2MP0CAP2 368 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 ZDHHC15Q96MV8 337 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 GLT8D2Q9H1C3 349 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 NPY5RQ15761 445 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 SLC35G1Q2M3R5 365 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 TMCO3Q6UWJ1 677 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 C15orf52Q6ZUT6 534 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 RRAGAQ7L523 313 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 MYCT1Q8N699 235 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 ANKRD13CQ8N6S4 541 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 TRIM9Q9C026 710 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 SH2D4AQ9H788 454 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 MRPL44Q9H9J2 332 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 PIM2Q9P1W9 311 aa13.85□□□□□ -0.19
SMARCA4-208ENST00000585799 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 MDM2Q00987 491 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 RAPGEF1Q13905 1077 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 CTTNQ14247 550 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 DALRD3Q5D0E6 543 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 CCDC181Q5TID7 509 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 CYP26C1Q6V0L0 522 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 OR8K1Q8NGG5 319 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 STX10O60499 249 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 RHOXF2BP0C7M4 288 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 CCNE1P24864 410 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 TNNT3P45378 269 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 STYK1Q6J9G0 422 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 ZNF771Q7L3S4 317 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 RHOXF2Q9BQY4 288 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 SPEF2Q9C093 1822 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 PLA2G4BP0C869 781 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 RIC8AQ9NPQ8 531 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 ZNF70Q9UC06 446 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 FAM198AQ9UFP1 575 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 MYO5AQ9Y4I1 1855 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-208ENST00000585799 ABCA3Q99758 1704 aa13.83□□□□□ -0.19
SMARCA4-208ENST00000585799 TERF1P54274 439 aa13.83□□□□□ -0.19
SMARCA4-208ENST00000585799 TMTC1Q8IUR5 882 aa13.83□□□□□ -0.19
SMARCA4-208ENST00000585799 SH2D3AQ9BRG2 576 aa13.83□□□□□ -0.19
SMARCA4-208ENST00000585799 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.19
SMARCA4-208ENST00000585799 TAOK3Q9H2K8 898 aa13.83□□□□□ -0.19
SMARCA4-208ENST00000585799 BHMT2Q9H2M3 363 aa13.83□□□□□ -0.19
SMARCA4-208ENST00000585799 CTAGE9A4FU28 777 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 MYMKA6NI61 221 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 PPP1R12BO60237 982 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 LRCH2Q5VUJ6 765 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 PDXDC2PQ6P474 469 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 DCAF4Q8WV16 495 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 HINFPQ9BQA5 517 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 NUDT12Q9BQG2 462 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 CGNQ9P2M7 1197 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 AKAP11Q9UKA4 1901 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 MYH3P11055 1940 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 TESPA1A2RU30 521 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 USO1O60763 962 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 FXR1P51114 621 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 CYP27A1Q02318 531 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 TRAF1Q13077 416 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 CCDC70Q6NSX1 233 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 RSBN1LQ6PCB5 846 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 ANKS1AQ92625 1134 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 TNFRSF25Q93038 417 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 PICK1Q9NRD5 415 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 CRYBG1Q9Y4K1 1723 aa13.83□□□□□ -0.2
SMARCA4-208ENST00000585799 CETN3O15182 167 aa13.82□□□□□ -0.2
SMARCA4-208ENST00000585799 CLIC2O15247 247 aa13.82□□□□□ -0.2
SMARCA4-208ENST00000585799 NOP2P46087 812 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms