RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 NHLH1Q02575 133 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
SDF2-203ENST00000585749 NEDD1Q8NHV4 660 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 CEP95Q96GE4 821 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 SCLYQ96I15 445 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 ABHD16BQ9H3Z7 469 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 MTMR4Q9NYA4 1195 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 USP34Q70CQ2 3546 aa10.93□□□□□ -0.66
SDF2-203ENST00000585749 SCN5AQ14524 2016 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 ASTN1O14525 1302 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 GRIN2DO15399 1336 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 ORC4O43929 436 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 TTLL1O95922 423 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 FGRP09769 529 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 TTLL4Q14679 1199 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
SDF2-203ENST00000585749 CWC27Q6UX04 472 aaKnown RBP10.92□□□□□ -0.66
SDF2-203ENST00000585749 CXCL17Q6UXB2 119 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 OXER1Q8TDS5 423 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 ARNTL2Q8WYA1 636 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 MKL1Q969V6 931 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 DDX11Q96FC9 970 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 FGD4Q96M96 766 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 AGBL1Q96MI9 1066 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 KATNBL1Q9H079 304 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 RIPK3Q9Y572 518 aa10.92□□□□□ -0.66
SDF2-203ENST00000585749 RAD50Q92878 1312 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.91□□□□□ -0.66
SDF2-203ENST00000585749 TSPY2A6NKD2 308 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 B4GALT4O60513 344 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 LPXNO60711 386 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 PCP11498 1178 aaKnown RBP10.91□□□□□ -0.66
SDF2-203ENST00000585749 TFAP4Q01664 338 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 TAP1Q03518 808 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 GRB10Q13322 594 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 ITGA7Q13683 1181 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 SNRNP48Q6IEG0 339 aaKnown RBP10.91□□□□□ -0.66
SDF2-203ENST00000585749 GMCL1P1Q8NEA9 526 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 TEX13BQ9BXU2 312 aa10.91□□□□□ -0.66
SDF2-203ENST00000585749 PTPRSQ13332 1948 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 F5H6K3 240 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 CABYRO75952 493 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 NDUFB10O96000 172 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 PFKMP08237 780 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 NT5C2P49902 561 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 KLRC3Q07444 240 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 FAM83BQ5T0W9 1011 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.9□□□□□ -0.66
SDF2-203ENST00000585749 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
SDF2-203ENST00000585749 ARMCX2Q7L311 632 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 SPRED2Q7Z698 418 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 FAM178BQ8IXR5 827 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 GJD3Q8N144 294 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 FBXL18Q96ME1 805 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 SLC9A7Q96T83 725 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 DSCC1Q9BVC3 393 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 CLIP2Q9UDT6 1046 aa10.9□□□□□ -0.66
SDF2-203ENST00000585749 RAD21O60216 631 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 NOVP48745 357 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 CCDC144CPQ8IYA2 1237 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 LRRC47Q8N1G4 583 aaKnown RBP10.89□□□□□ -0.67
SDF2-203ENST00000585749 STAG1Q8WVM7 1258 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 UIMC1Q96RL1 719 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 SLF1Q9BQI6 1058 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 SEZ6LQ9BYH1 1024 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 KCNH6Q9H252 994 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 RNF41Q9H4P4 317 aaPredicted RBP10.89□□□□□ -0.67
SDF2-203ENST00000585749 TSHZ2Q9NRE2 1034 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 LHX6Q9UPM6 363 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 GNEQ9Y223 722 aaKnown RBP10.89□□□□□ -0.67
SDF2-203ENST00000585749 ZNF318Q5VUA4 2279 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 TANC1Q9C0D5 1861 aa10.89□□□□□ -0.67
SDF2-203ENST00000585749 ATP2A1O14983 1001 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 RANBP6O60518 1105 aaKnown RBP10.88□□□□□ -0.67
SDF2-203ENST00000585749 PTGS1P23219 599 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 HAND2P61296 217 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 PSMC6P62333 389 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 TNFAIP2Q03169 654 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 FSCN1Q16658 493 aaKnown RBP10.88□□□□□ -0.67
SDF2-203ENST00000585749 ERICH6BQ5W0A0 696 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 MFSD6Q6ZSS7 791 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 DEFB128Q7Z7B8 93 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 TLK2Q86UE8 772 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 TBC1D10CQ8IV04 446 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 PHOSPHO2Q8TCD6 241 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 RUFY2Q8WXA3 655 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 NUP88Q99567 741 aaPredicted RBP10.88□□□□□ -0.67
SDF2-203ENST00000585749 IL25Q9H293 177 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 ALDH8A1Q9H2A2 487 aaPredicted RBP10.88□□□□□ -0.67
SDF2-203ENST00000585749 UBE2ZQ9H832 354 aaPredicted RBP10.88□□□□□ -0.67
SDF2-203ENST00000585749 INCENPQ9NQS7 918 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 IL17RBQ9NRM6 502 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 TOMM22Q9NS69 142 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 TCP11L1Q9NUJ3 509 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 STX8Q9UNK0 236 aa10.88□□□□□ -0.67
SDF2-203ENST00000585749 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms