RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 IWS1Q96ST2 819 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 DSCC1Q9BVC3 393 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 KAT14Q9H8E8 782 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 SLC4A7Q9Y6M7 1214 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 ABCB11O95342 1321 aa17.56■□□□□ 0.4
VAPA-209ENST00000585042 TXNP10599 105 aaKnown RBP17.56■□□□□ 0.4
VAPA-209ENST00000585042 NBPF20Q3BBV1 942 aa17.56■□□□□ 0.4
VAPA-209ENST00000585042 NSUN6Q8TEA1 469 aaKnown RBP17.56■□□□□ 0.4
VAPA-209ENST00000585042 ZSCAN10Q96SZ4 725 aaPredicted RBP17.56■□□□□ 0.4
VAPA-209ENST00000585042 DIAPH3Q9NSV4 1193 aa17.56■□□□□ 0.4
VAPA-209ENST00000585042 PCDHA11Q9Y5I1 949 aa17.56■□□□□ 0.4
VAPA-209ENST00000585042 NEDD4P46934 1319 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 PITPNM1O00562 1244 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 KDM4AO75164 1064 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 IMMTQ16891 758 aaKnown RBP17.55■□□□□ 0.4
VAPA-209ENST00000585042 TJAP1Q5JTD0 557 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 B4GALNT3Q6L9W6 998 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 CCDC62Q6P9F0 684 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
VAPA-209ENST00000585042 ADGRF4Q8IZF3 695 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 ATXN2LQ8WWM7 1075 aaKnown RBP17.55■□□□□ 0.4
VAPA-209ENST00000585042 VWCEQ96DN2 955 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 KRT23Q9C075 422 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 UBA5Q9GZZ9 404 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 PRDM12Q9H4Q4 367 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 CNNM2Q9H8M5 875 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 TRMT13Q9NUP7 481 aaKnown RBP17.55■□□□□ 0.4
VAPA-209ENST00000585042 ZSWIM5Q9P217 1185 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 SCN10AQ9Y5Y9 1956 aa17.55■□□□□ 0.4
VAPA-209ENST00000585042 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
VAPA-209ENST00000585042 ACTN1P12814 892 aa17.54■□□□□ 0.4
VAPA-209ENST00000585042 STXBP2Q15833 593 aa17.54■□□□□ 0.4
VAPA-209ENST00000585042 USH1GQ495M9 461 aa17.54■□□□□ 0.4
VAPA-209ENST00000585042 PHOSPHO2Q8TCD6 241 aa17.54■□□□□ 0.4
VAPA-209ENST00000585042 MAP3K20Q9NYL2 800 aaKnown RBP17.54■□□□□ 0.4
VAPA-209ENST00000585042 MRPL11Q9Y3B7 192 aaKnown RBP17.54■□□□□ 0.4
VAPA-209ENST00000585042 CHD9Q3L8U1 2897 aa17.54■□□□□ 0.4
VAPA-209ENST00000585042 VCANP13611 3396 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 IGHDP01880 384 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 CYP2C9P11712 490 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
VAPA-209ENST00000585042 BFSP2Q13515 415 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 CDC37Q16543 378 aaPredicted RBP17.53■□□□□ 0.4
VAPA-209ENST00000585042 SAMD3Q8N6K7 520 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 ENAHQ8N8S7 591 aaPredicted RBP17.53■□□□□ 0.4
VAPA-209ENST00000585042 USP38Q8NB14 1042 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 RETREG2Q8NC44 543 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 SCLYQ96I15 445 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 NKX2-4Q9H2Z4 354 aa17.53■□□□□ 0.4
VAPA-209ENST00000585042 MYO9BQ13459 2157 aa17.52■□□□□ 0.4
VAPA-209ENST00000585042 B4E1Z4 1266 aa17.52■□□□□ 0.4
VAPA-209ENST00000585042 GH1P01241 217 aa17.52■□□□□ 0.4
VAPA-209ENST00000585042 PARP1P09874 1014 aaKnown RBP17.52■□□□□ 0.4
VAPA-209ENST00000585042 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.4
VAPA-209ENST00000585042 SESTD1Q86VW0 696 aa17.52■□□□□ 0.4
VAPA-209ENST00000585042 FBXO11Q86XK2 927 aa17.52■□□□□ 0.4
VAPA-209ENST00000585042 SYTL5Q8TDW5 730 aaPredicted RBP17.52■□□□□ 0.4
VAPA-209ENST00000585042 YBX2Q9Y2T7 364 aaKnown RBP17.52■□□□□ 0.4
VAPA-209ENST00000585042 ZBBXA8MT70 800 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 EIF3JO75822 258 aaKnown RBP17.51■□□□□ 0.39
VAPA-209ENST00000585042 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
VAPA-209ENST00000585042 IQCF3P0C7M6 154 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
VAPA-209ENST00000585042 TRAF1Q13077 416 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 ADGRE1Q14246 886 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 CCDC155Q8N6L0 562 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 TBC1D5Q92609 795 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 COPS5Q92905 334 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 EMID1Q96A84 441 aaPredicted RBP17.51■□□□□ 0.39
VAPA-209ENST00000585042 TAAR1Q96RJ0 339 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 RMDN3Q96TC7 470 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 JMJD4Q9H9V9 463 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 LAMA4Q16363 1823 aa17.51■□□□□ 0.39
VAPA-209ENST00000585042 ARIH2O95376 493 aa17.5■□□□□ 0.39
VAPA-209ENST00000585042 POU3F3P20264 500 aaPredicted RBP17.5■□□□□ 0.39
VAPA-209ENST00000585042 GHRHRQ02643 423 aa17.5■□□□□ 0.39
VAPA-209ENST00000585042 QRICH1Q2TAL8 776 aa17.5■□□□□ 0.39
VAPA-209ENST00000585042 TMEM67Q5HYA8 995 aa17.5■□□□□ 0.39
VAPA-209ENST00000585042 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
VAPA-209ENST00000585042 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
VAPA-209ENST00000585042 CPVLQ9H3G5 476 aa17.5■□□□□ 0.39
VAPA-209ENST00000585042 NOD1Q9Y239 953 aa17.5■□□□□ 0.39
VAPA-209ENST00000585042 BAIAP3O94812 1187 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 IGFBP4P22692 258 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 RABGGTBP53611 331 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 ARHGAP1Q07960 439 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 DGKDQ16760 1214 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 LY6KQ17RY6 165 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 IFIT1BQ5T764 474 aaKnown RBP17.49■□□□□ 0.39
VAPA-209ENST00000585042 ARHGEF16Q5VV41 709 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 PPP2R2DQ66LE6 453 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 KCNV1Q6PIU1 500 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 SEPT14Q6ZU15 432 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 DEFB128Q7Z7B8 93 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 AFAP1L1Q8TED9 768 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 AFG1LQ8WV93 481 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 ASB2Q96Q27 587 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 AMNQ9BXJ7 453 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms