RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 FASTKD5Q7L8L6 764 aaKnown RBP15.84■□□□□ 0.13
UBBP4-202ENST00000584755 MB21D1Q8N884 522 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 IGSF22Q8N9C0 903 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 SLC10A4Q96EP9 437 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 TRERF1Q96PN7 1200 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 TEX13BQ9BXU2 312 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 EHMT1Q9H9B1 1298 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 KCNMB3Q9NPA1 279 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 POLR2DO15514 142 aaKnown RBP15.84■□□□□ 0.13
UBBP4-202ENST00000584755 ACTN4O43707 911 aaKnown RBP15.84■□□□□ 0.13
UBBP4-202ENST00000584755 SNAPC2Q13487 334 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 CHADLQ6NUI6 762 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 POTEEQ6S8J3 1075 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 CKAP2LQ8IYA6 745 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 HAS1Q92839 578 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 LENG9Q96B70 501 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 SDF4Q9BRK5 362 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 PYM1Q9BRP8 204 aaKnown RBP15.84■□□□□ 0.13
UBBP4-202ENST00000584755 CCSER1Q9C0I3 900 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 TSPY26PQ9H489 355 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 ZNF408Q9H9D4 720 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 USP25Q9UHP3 1055 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 RABGAP1Q9Y3P9 1069 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 RIPK3Q9Y572 518 aa15.84■□□□□ 0.13
UBBP4-202ENST00000584755 A0A087X0B3 334 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 TBX3O15119 743 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 CELF2O95319 508 aaKnown RBP15.83■□□□□ 0.12
UBBP4-202ENST00000584755 PDIA5Q14554 519 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 E2F4Q16254 413 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 SNRNP48Q6IEG0 339 aaKnown RBP15.83■□□□□ 0.12
UBBP4-202ENST00000584755 GPAT2Q6NUI2 795 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 FCHSD1Q86WN1 690 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 C2orf69Q8N8R5 385 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 SYTL5Q8TDW5 730 aaPredicted RBP15.83■□□□□ 0.12
UBBP4-202ENST00000584755 RNF146Q9NTX7 359 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
UBBP4-202ENST00000584755 COL20A1Q9P218 1284 aa15.83■□□□□ 0.12
UBBP4-202ENST00000584755 FAM86B1E9PN63 330 aa15.82■□□□□ 0.12
UBBP4-202ENST00000584755 FAM86B2P0C5J1 330 aa15.82■□□□□ 0.12
UBBP4-202ENST00000584755 CCDC192P0DO97 292 aa15.82■□□□□ 0.12
UBBP4-202ENST00000584755 STAT3P40763 770 aa15.82■□□□□ 0.12
UBBP4-202ENST00000584755 MDM2Q00987 491 aaPredicted RBP15.82■□□□□ 0.12
UBBP4-202ENST00000584755 PABPC4Q13310 644 aaKnown RBP eCLIP15.82■□□□□ 0.129e-18■■■■■ 59.7
UBBP4-202ENST00000584755 CNNM3Q8NE01 707 aa15.82■□□□□ 0.12
UBBP4-202ENST00000584755 ETNPPLQ8TBG4 499 aa15.82■□□□□ 0.12
UBBP4-202ENST00000584755 ASCC2Q9H1I8 757 aaPredicted RBP15.82■□□□□ 0.12
UBBP4-202ENST00000584755 KIAA1468Q9P260 1216 aa15.82■□□□□ 0.12
UBBP4-202ENST00000584755 TRPM7Q96QT4 1865 aa15.82■□□□□ 0.12
UBBP4-202ENST00000584755 IGLV3-22A0A075B6J6 115 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 SLFN14P0C7P3 912 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 TXLNAP40222 546 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 RPS6P62753 249 aaKnown RBP15.81■□□□□ 0.12
UBBP4-202ENST00000584755 IRX3P78415 501 aaPredicted RBP15.81■□□□□ 0.12
UBBP4-202ENST00000584755 TYRO3Q06418 890 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 CST9Q5W186 159 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 KANK3Q6NY19 840 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 SH3RF1Q7Z6J0 888 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 MS4A4AQ96JQ5 239 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 HOMER2Q9NSB8 354 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 SERTAD1Q9UHV2 236 aa15.81■□□□□ 0.12
UBBP4-202ENST00000584755 TECP42680 631 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 TXKP42681 527 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 MRE11P49959 708 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 HERVK_113P62684 666 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 TMEM266Q2M3C6 531 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 RNF207Q6ZRF8 634 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 RIOX2Q8IUF8 465 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 SLFN12Q8IYM2 578 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 PDILTQ8N807 584 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 IQUBQ8NA54 791 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 CHST13Q8NET6 341 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 ZNF526Q8TF50 670 aaPredicted RBP15.8■□□□□ 0.12
UBBP4-202ENST00000584755 RAB34Q9BZG1 259 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 RBSNQ9H1K0 784 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 GRPEL1Q9HAV7 217 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 BTBD7Q9P203 1132 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 TUBE1Q9UJT0 475 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 SLC45A1Q9Y2W3 748 aa15.8■□□□□ 0.12
UBBP4-202ENST00000584755 PP2D1A8MPX8 630 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 CNMDO75829 334 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 ZBTB48P10074 688 aaPredicted RBP15.79■□□□□ 0.12
UBBP4-202ENST00000584755 UBA7P41226 1012 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 GTF2A2P52657 109 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 PRR16Q569H4 304 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 L1TD1Q5T7N2 865 aaKnown RBP15.79■□□□□ 0.12
UBBP4-202ENST00000584755 PDXDC2PQ6P474 469 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 SASS6Q6UVJ0 657 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 SLC30A10Q6XR72 485 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.79■□□□□ 0.12
UBBP4-202ENST00000584755 DHX58Q96C10 678 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 FAM20AQ96MK3 541 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 MMTAG2Q9BU76 263 aaKnown RBP15.79■□□□□ 0.12
UBBP4-202ENST00000584755 PANK2Q9BZ23 570 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 ACAD9Q9H845 621 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 TTC12Q9H892 705 aaPredicted RBP15.79■□□□□ 0.12
UBBP4-202ENST00000584755 DISC1Q9NRI5 854 aa15.79■□□□□ 0.12
UBBP4-202ENST00000584755 HOOK1Q9UJC3 728 aaKnown RBP15.79■□□□□ 0.12
UBBP4-202ENST00000584755 MEIS1O00470 390 aa15.78■□□□□ 0.12
UBBP4-202ENST00000584755 SLC26A4O43511 780 aa15.78■□□□□ 0.12
UBBP4-202ENST00000584755 CETPP11597 493 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms