RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 KIAA1211Q6ZU35 1233 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 VWCEQ96DN2 955 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 FBXL18Q96ME1 805 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 TTC14Q96N46 770 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 TRPV6Q9H1D0 765 aa12.72□□□□□ -0.37
PGAP3-209ENST00000584620 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 ZBBXA8MT70 800 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 B4GALT4O60513 344 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 CA3P07451 260 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.37
PGAP3-209ENST00000584620 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
PGAP3-209ENST00000584620 EDNRBP24530 442 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 CHD1LQ86WJ1 897 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 ZKSCAN3Q9BRR0 538 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 NOC4LQ9BVI4 516 aaKnown RBP12.71□□□□□ -0.37
PGAP3-209ENST00000584620 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 WNT8AQ9H1J5 351 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 HIPK3Q9H422 1215 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 OSBPL3Q9H4L5 887 aa12.71□□□□□ -0.37
PGAP3-209ENST00000584620 WDR19Q8NEZ3 1342 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 LOC102724159A0A0B4J2E5 919 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 ZEB2O60315 1214 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
PGAP3-209ENST00000584620 CALML3P27482 149 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
PGAP3-209ENST00000584620 NUCB1Q02818 461 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 AAMPQ13685 434 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 PWP2Q15269 919 aaKnown RBP12.7□□□□□ -0.38
PGAP3-209ENST00000584620 ARNTL2Q8WYA1 636 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
PGAP3-209ENST00000584620 ADD3Q9UEY8 706 aaKnown RBP12.7□□□□□ -0.38
PGAP3-209ENST00000584620 LCTP09848 1927 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 PURAQ00577 322 aaKnown RBP12.69□□□□□ -0.38
PGAP3-209ENST00000584620 CSPP1Q1MSJ5 1256 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 TMEM67Q5HYA8 995 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
PGAP3-209ENST00000584620 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 GJD3Q8N144 294 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 ESR2Q92731 530 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 SEZ6LQ9BYH1 1024 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
PGAP3-209ENST00000584620 ALDH8A1Q9H2A2 487 aaPredicted RBP12.69□□□□□ -0.38
PGAP3-209ENST00000584620 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
PGAP3-209ENST00000584620 RNF41Q9H4P4 317 aaPredicted RBP12.69□□□□□ -0.38
PGAP3-209ENST00000584620 ZNF213O14771 459 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 KDM4AO75164 1064 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 ARHGEF15O94989 841 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 SSTR3P32745 418 aaPredicted RBP12.68□□□□□ -0.38
PGAP3-209ENST00000584620 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
PGAP3-209ENST00000584620 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
PGAP3-209ENST00000584620 DNERQ8NFT8 737 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 EXOC6Q8TAG9 804 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 TBC1D5Q92609 795 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 COPS5Q92905 334 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 SCLYQ96I15 445 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 IL25Q9H293 177 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 TRMT13Q9NUP7 481 aaKnown RBP12.68□□□□□ -0.38
PGAP3-209ENST00000584620 PNMA2Q9UL42 364 aa12.68□□□□□ -0.38
PGAP3-209ENST00000584620 BRWD1Q9NSI6 2320 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 B4E1Z4 1266 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 ARIH2O95376 493 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 CYP2C9P11712 490 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 PDE4DQ08499 809 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 GRB10Q13322 594 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 TTLL4Q14679 1199 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 USH1GQ495M9 461 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 SPRED2Q7Z698 418 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 OR6J1Q8NGC5 347 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 POLR3EQ9NVU0 708 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 ZSWIM5Q9P217 1185 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 COL20A1Q9P218 1284 aa12.67□□□□□ -0.38
PGAP3-209ENST00000584620 A6NJR5 290 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 MYL3P08590 195 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 CPT1AP50416 773 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 TAP1Q03518 808 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 PPP2R5BQ15173 497 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 CCDC62Q6P9F0 684 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 FAM178BQ8IXR5 827 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
PGAP3-209ENST00000584620 ADGRF4Q8IZF3 695 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 ENAHQ8N8S7 591 aaPredicted RBP12.66□□□□□ -0.38
PGAP3-209ENST00000584620 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
PGAP3-209ENST00000584620 SCFD2Q8WU76 684 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
PGAP3-209ENST00000584620 MTG1Q9BT17 334 aaPredicted RBP12.66□□□□□ -0.38
PGAP3-209ENST00000584620 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
PGAP3-209ENST00000584620 TNKSO95271 1327 aa12.65□□□□□ -0.38
PGAP3-209ENST00000584620 NKRFO15226 690 aaKnown RBP eCLIP12.65□□□□□ -0.38
PGAP3-209ENST00000584620 LPXNO60711 386 aa12.65□□□□□ -0.38
PGAP3-209ENST00000584620 NT5C2P49902 561 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms