RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 MYOCDQ8IZQ8 938 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 NUDT12Q9BQG2 462 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 TRIM9Q9C026 710 aa12.56□□□□□ -0.4
TOP3A-217ENST00000584582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.56□□□□□ -0.4
TOP3A-217ENST00000584582 DISP2A7MBM2 1401 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 PNMA6FA0A0J9YX94 578 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-217ENST00000584582 GYPCP04921 128 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 ADRA2BP18089 450 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 POLR2FP61218 127 aaKnown RBP12.55□□□□□ -0.4
TOP3A-217ENST00000584582 JMJD4Q9H9V9 463 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 DNM3Q9UQ16 869 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 CLCN6P51797 869 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 NYAP1Q6ZVC0 841 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 MYCT1Q8N699 235 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 RUFY1Q96T51 708 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
TOP3A-217ENST00000584582 ALAS1P13196 640 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 LMAN1P49257 510 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 DNM2P50570 870 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 CTTNQ14247 550 aaKnown RBP12.55□□□□□ -0.4
TOP3A-217ENST00000584582 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 ABHD10Q9NUJ1 306 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 ADGRG1Q9Y653 693 aa12.55□□□□□ -0.4
TOP3A-217ENST00000584582 A0A1B0GTH6 734 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 MYMKA6NI61 221 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 POLRMTO00411 1230 aaKnown RBP12.54□□□□□ -0.4
TOP3A-217ENST00000584582 MAGEA1P43355 309 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 CYP2J2P51589 502 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 RHBDL3P58872 404 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 PPP4CP60510 307 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 CT47A1Q5JQC4 288 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-217ENST00000584582 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
TOP3A-217ENST00000584582 PRAMEF18Q5VWM3 479 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 GALNT17Q6IS24 598 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 MB21D1Q8N884 522 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 AMNQ9BXJ7 453 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 IFIH1Q9BYX4 1025 aaKnown RBP12.54□□□□□ -0.4
TOP3A-217ENST00000584582 ZBTB5O15062 677 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
TOP3A-217ENST00000584582 KRT83P78385 493 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 ZNF543Q08ER8 600 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 GLIS3Q8NEA6 775 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 CEP89Q96ST8 783 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 MTRQ99707 1265 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 HSD3B7Q9H2F3 369 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 BHMT2Q9H2M3 363 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 RGL1Q9NZL6 768 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 OGFRQ9NZT2 677 aa12.54□□□□□ -0.4
TOP3A-217ENST00000584582 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 ABL1P00519 1130 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 CCNE1P24864 410 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 LLGL1Q15334 1064 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 KCTD19Q17RG1 926 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-217ENST00000584582 FAM83BQ5T0W9 1011 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 MED15Q96RN5 788 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 LSM14BQ9BX40 385 aaKnown RBP12.53□□□□□ -0.4
TOP3A-217ENST00000584582 NDUFA10O95299 355 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 SRGNP10124 158 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 BMP3P12645 472 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 ADAM9Q13443 819 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 PARP4Q9UKK3 1724 aaKnown RBP12.53□□□□□ -0.4
TOP3A-217ENST00000584582 ECE1P42892 770 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 NPY5RQ15761 445 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 PDXDC2PQ6P474 469 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 REXO1L1PQ8IX06 675 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 PRMT6Q96LA8 375 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-217ENST00000584582 ZMYND12Q9H0C1 365 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 EP400Q96L91 3159 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 ATRNO75882 1429 aa12.53□□□□□ -0.4
TOP3A-217ENST00000584582 CETN3O15182 167 aa12.52□□□□□ -0.4
TOP3A-217ENST00000584582 PLA2G4BP0C869 781 aa12.52□□□□□ -0.4
TOP3A-217ENST00000584582 RASSF7Q02833 373 aa12.52□□□□□ -0.4
TOP3A-217ENST00000584582 SPZ1Q9BXG8 430 aa12.52□□□□□ -0.4
TOP3A-217ENST00000584582 SH3GLB2Q9NR46 395 aa12.52□□□□□ -0.4
TOP3A-217ENST00000584582 COL18A1P39060 1754 aa12.52□□□□□ -0.4
TOP3A-217ENST00000584582 PAFAH1B1P43034 410 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 SARSP49591 514 aaKnown RBP12.52□□□□□ -0.41
TOP3A-217ENST00000584582 HLTFQ14527 1009 aaKnown RBP eCLIP12.52□□□□□ -0.41
TOP3A-217ENST00000584582 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 TMC4Q7Z404 712 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 ADSSL1Q8N142 457 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 IFT81Q8WYA0 676 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 CRAMP1Q96RY5 1269 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 MYH2Q9UKX2 1941 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 TAF1P21675 1872 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 GAS7O60861 476 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 TACC1O75410 805 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 RXRBP28702 533 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 ARHGAP44Q17R89 818 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.41
TOP3A-217ENST00000584582 TMED8Q6PL24 325 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-217ENST00000584582 DNAAF5Q86Y56 855 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms