RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-223ENST00000584527 ZSCAN10Q96SZ4 725 aaPredicted RBP17.66■□□□□ 0.42
SPECC1-223ENST00000584527 MPHOSPH6Q99547 160 aaKnown RBP17.66■□□□□ 0.42
SPECC1-223ENST00000584527 WDR11Q9BZH6 1224 aa17.66■□□□□ 0.42
SPECC1-223ENST00000584527 WNT8AQ9H1J5 351 aa17.66■□□□□ 0.42
SPECC1-223ENST00000584527 ALDH8A1Q9H2A2 487 aaPredicted RBP17.66■□□□□ 0.42
SPECC1-223ENST00000584527 TAF6LQ9Y6J9 622 aa17.66■□□□□ 0.42
SPECC1-223ENST00000584527 UMODL1Q5DID0 1318 aa17.66■□□□□ 0.42
SPECC1-223ENST00000584527 PFKMP08237 780 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 SUPT20HL2P0C7V6 817 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 PTGS1P23219 599 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 PBX2P40425 430 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 PURAQ00577 322 aaKnown RBP17.65■□□□□ 0.42
SPECC1-223ENST00000584527 KRT32Q14532 448 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 SART3Q15020 963 aaKnown RBP17.65■□□□□ 0.42
SPECC1-223ENST00000584527 TMEM63BQ5T3F8 832 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 GPATCH4Q5T3I0 446 aaKnown RBP17.65■□□□□ 0.42
SPECC1-223ENST00000584527 SLC30A10Q6XR72 485 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 RNF207Q6ZRF8 634 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 RGS22Q8NE09 1264 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 KCNB2Q92953 911 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 GAS2L1Q99501 681 aaPredicted RBP17.65■□□□□ 0.42
SPECC1-223ENST00000584527 MTA3Q9BTC8 594 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 TRPV6Q9H1D0 765 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 CXXC1Q9P0U4 656 aaPredicted RBP17.65■□□□□ 0.42
SPECC1-223ENST00000584527 MSRAQ9UJ68 235 aa17.65■□□□□ 0.42
SPECC1-223ENST00000584527 FRMPD2Q68DX3 1309 aaPredicted RBP17.65■□□□□ 0.42
SPECC1-223ENST00000584527 SCN10AQ9Y5Y9 1956 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 GRXCR1A8MXD5 290 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 HSPA4P34932 840 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 PSMC6P62333 389 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 CYB5R4Q7L1T6 521 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 MB21D2Q8IYB1 491 aaPredicted RBP17.64■□□□□ 0.41
SPECC1-223ENST00000584527 RPUSD2Q8IZ73 545 aaKnown RBP17.64■□□□□ 0.41
SPECC1-223ENST00000584527 ENAHQ8N8S7 591 aaPredicted RBP17.64■□□□□ 0.41
SPECC1-223ENST00000584527 USP38Q8NB14 1042 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 ZKSCAN3Q9BRR0 538 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 TNKSO95271 1327 aa17.64■□□□□ 0.41
SPECC1-223ENST00000584527 CHD9Q3L8U1 2897 aa17.63■□□□□ 0.41
SPECC1-223ENST00000584527 ERICH2A1L162 156 aa17.63■□□□□ 0.41
SPECC1-223ENST00000584527 B4DLN1 442 aa17.63■□□□□ 0.41
SPECC1-223ENST00000584527 MCM5P33992 734 aa17.63■□□□□ 0.41
SPECC1-223ENST00000584527 MRPL12P52815 198 aaKnown RBP17.63■□□□□ 0.41
SPECC1-223ENST00000584527 RPS6P62753 249 aaKnown RBP17.63■□□□□ 0.41
SPECC1-223ENST00000584527 BRDTQ58F21 947 aaPredicted RBP17.63■□□□□ 0.41
SPECC1-223ENST00000584527 SCFD2Q8WU76 684 aa17.63■□□□□ 0.41
SPECC1-223ENST00000584527 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
SPECC1-223ENST00000584527 KAT14Q9H8E8 782 aa17.63■□□□□ 0.41
SPECC1-223ENST00000584527 A6NJR5 290 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 KPNA6O60684 536 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 CALML3P27482 149 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 CCL23P55773 120 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 PDE4DQ08499 809 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 PPP2R5BQ15173 497 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 SEC23AQ15436 765 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 TJAP1Q5JTD0 557 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 VWCEQ96DN2 955 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 MTG1Q9BT17 334 aaPredicted RBP17.62■□□□□ 0.41
SPECC1-223ENST00000584527 TTC28Q96AY4 2481 aa17.62■□□□□ 0.41
SPECC1-223ENST00000584527 GBF1Q92538 1859 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 PITPNM1O00562 1244 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 IFIT3O14879 490 aaKnown RBP17.61■□□□□ 0.41
SPECC1-223ENST00000584527 HMGB1P09429 215 aaKnown RBP17.61■□□□□ 0.41
SPECC1-223ENST00000584527 PTPN11Q06124 597 aaPredicted RBP17.61■□□□□ 0.41
SPECC1-223ENST00000584527 IFIT1BQ5T764 474 aaKnown RBP17.61■□□□□ 0.41
SPECC1-223ENST00000584527 NFRKBQ6P4R8 1299 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 OTOP2Q7RTS6 562 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 PNMA1Q8ND90 353 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 OR6J1Q8NGC5 347 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 PRDM12Q9H4Q4 367 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 SLC28A3Q9HAS3 691 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 TANC1Q9C0D5 1861 aa17.61■□□□□ 0.41
SPECC1-223ENST00000584527 PRC1O43663 620 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 RFC2P35250 354 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 ANTXR2P58335 489 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 WTAPQ15007 396 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 TMEM67Q5HYA8 995 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 TMTC2Q8N394 836 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 ATXN2LQ8WWM7 1075 aaKnown RBP17.6■□□□□ 0.41
SPECC1-223ENST00000584527 TMEM87BQ96K49 555 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 GPHNQ9NQX3 736 aaPredicted RBP17.6■□□□□ 0.41
SPECC1-223ENST00000584527 TRMT13Q9NUP7 481 aaKnown RBP17.6■□□□□ 0.41
SPECC1-223ENST00000584527 YBX2Q9Y2T7 364 aaKnown RBP17.6■□□□□ 0.41
SPECC1-223ENST00000584527 PCDHA11Q9Y5I1 949 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 SLC4A7Q9Y6M7 1214 aa17.6■□□□□ 0.41
SPECC1-223ENST00000584527 MYL3P08590 195 aa17.59■□□□□ 0.41
SPECC1-223ENST00000584527 ADGRE1Q14246 886 aa17.59■□□□□ 0.41
SPECC1-223ENST00000584527 TTLL4Q14679 1199 aa17.59■□□□□ 0.41
SPECC1-223ENST00000584527 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
SPECC1-223ENST00000584527 SCLYQ96I15 445 aa17.59■□□□□ 0.41
SPECC1-223ENST00000584527 NKX2-4Q9H2Z4 354 aa17.59■□□□□ 0.41
SPECC1-223ENST00000584527 SNX14Q9Y5W7 946 aa17.59■□□□□ 0.41
SPECC1-223ENST00000584527 ABCB11O95342 1321 aa17.58■□□□□ 0.4
SPECC1-223ENST00000584527 NBPF20Q3BBV1 942 aa17.58■□□□□ 0.4
SPECC1-223ENST00000584527 ASPRV1Q53RT3 343 aa17.58■□□□□ 0.4
SPECC1-223ENST00000584527 DHX32Q7L7V1 743 aaKnown RBP17.58■□□□□ 0.4
SPECC1-223ENST00000584527 CHST3Q7LGC8 479 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms