RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 GPHNQ9NQX3 736 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TIMP1P01033 207 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 EIF2AK2P19525 551 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 EPHB4P54760 987 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TROAPQ12815 778 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 BRDTQ58F21 947 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CREB3L3Q68CJ9 461 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 FAM126BQ8IXS8 530 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MTMR8Q96EF0 704 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MYL10Q9BUA6 226 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PPP1R12CQ9BZL4 782 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TBX21Q9UL17 535 aa15.82■□□□□ 0.12
CDK5RAP3-233ENST00000584186 COL6A3P12111 3177 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 NKRFO15226 690 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 GRIN2DO15399 1336 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 ARIH2O95376 493 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 HOXA13P31271 388 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MCM5P33992 734 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TTLL4Q14679 1199 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 STXBP2Q15833 593 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 SLC35G1Q2M3R5 365 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 GPR153Q6NV75 609 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 ZNF654Q8IZM8 581 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CCDC136Q96JN2 1154 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 IWS1Q96ST2 819 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MAF1Q9H063 256 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TRPV6Q9H1D0 765 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 LY9Q9HBG7 655 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 POLR3EQ9NVU0 708 aa15.81■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MYH6P13533 1939 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CCDC69A6NI79 296 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 OPLAHO14841 1288 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CYTH3O43739 400 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CHMP4BP1P59074 171 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TRAF1Q13077 416 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MFSD5Q6N075 450 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 SLC43A3Q8NBI5 491 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CTCFLQ8NI51 663 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 RNPC3Q96LT9 517 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 RIOX1Q9H6W3 641 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PXMP2Q9NR77 195 aa15.8■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PNMA6FA0A0J9YX94 578 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 SH2B2O14492 632 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CD4P01730 458 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MYCLP12524 364 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 KIF5BP33176 963 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 HSD17B4P51659 736 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PURAQ00577 322 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 NECTIN1Q15223 517 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 LY6KQ17RY6 165 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TMEM199Q8N511 208 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PPP1R13LQ8WUF5 828 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MTG1Q9BT17 334 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 LRRC2Q9BYS8 371 aa15.79■□□□□ 0.12
CDK5RAP3-233ENST00000584186 GCOM1H8Y6P7 765 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 B4GALT4O60513 344 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CDC45O75419 566 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 EIF3JO75822 258 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 DDAH1O94760 285 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 NR3C2P08235 984 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 POLR2MP0CAP2 368 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CSF2RAP15509 400 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 RXRAP19793 462 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CYP2C18P33260 490 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 FAM47CQ5HY64 1035 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 RNF20Q5VTR2 975 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CCDC62Q6P9F0 684 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 FCHSD1Q86WN1 690 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 RAB11FIP4Q86YS3 637 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TMEM87BQ96K49 555 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 FAM161BQ96MY7 647 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 HIPK3Q9H422 1215 aa15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TRMT13Q9NUP7 481 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-233ENST00000584186 A6NJR5 290 aa15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 KPNA6O60684 536 aa15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 GH1P01241 217 aa15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 ACRP10323 421 aa15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PPIGQ13427 754 aaKnown RBP eCLIP15.77■□□□□ 0.124e-14■■■■□ 21.6
CDK5RAP3-233ENST00000584186 TMTC2Q8N394 836 aa15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 AFG1LQ8WV93 481 aa15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 RRP36Q96EU6 259 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 SEZ6LQ9BYH1 1024 aa15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 ALDH8A1Q9H2A2 487 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MAP3K20Q9NYL2 800 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 SEC63Q9UGP8 760 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MRVI1Q9Y6F6 885 aa15.77■□□□□ 0.12
CDK5RAP3-233ENST00000584186 UMODL1Q5DID0 1318 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 CCL23P55773 120 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 GHRHRQ02643 423 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 ARHGAP1Q07960 439 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 NBPF20Q3BBV1 942 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 ZNF697Q5TEC3 545 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 CMTR1Q8N1G2 835 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 MAP3K14Q99558 947 aa15.76■□□□□ 0.11
CDK5RAP3-233ENST00000584186 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.76■□□□□ 0.119e-16■□□□□ 8.9
CDK5RAP3-233ENST00000584186 PDCD2LQ9BRP1 358 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms