RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 KLHL14Q9P2G3 628 aa5.9□□□□□ -1.46
SKA2-210ENST00000584089 TRBV23-1A0A0A0MS06 115 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 MYOCOSA0A1B0GUC4 107 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 NUDT19A8MXV4 375 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 FUCA1P04066 466 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 MAPKAPK2P49137 400 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 Q8N1Y9 231 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 NETO2Q8NC67 525 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 PLEKHO2Q8TD55 490 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 THAP3Q8WTV1 239 aaPredicted RBP5.89□□□□□ -1.47
SKA2-210ENST00000584089 DCAF4Q8WV16 495 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 SLC38A3Q99624 504 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 KCNK12Q9HB15 430 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 MARCH2Q9P0N8 246 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 FBLN5Q9UBX5 448 aa5.89□□□□□ -1.47
SKA2-210ENST00000584089 TEX51A0A1B0GUA7 166 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 SEMA7AO75326 666 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 LCP1P13796 627 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 VIPR1P32241 457 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 BCL6P41182 706 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 SUMO1P63165 101 aaKnown RBP5.88□□□□□ -1.47
SKA2-210ENST00000584089 LSAMPQ13449 338 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 NTRK3Q16288 839 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 FAM209AQ5JX71 171 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 ZNF648Q5T619 568 aaPredicted RBP5.88□□□□□ -1.47
SKA2-210ENST00000584089 FOXB2Q5VYV0 432 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 RPTNQ6XPR3 784 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 SYDE1Q6ZW31 735 aaPredicted RBP5.88□□□□□ -1.47
SKA2-210ENST00000584089 LILRB2Q8N423 598 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 BHLHE22Q8NFJ8 381 aaPredicted RBP5.88□□□□□ -1.47
SKA2-210ENST00000584089 PPP1R16BQ96T49 567 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 ZFYVE21Q9BQ24 234 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 DHRS4Q9BTZ2 278 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 PHF20Q9BVI0 1012 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 MCOLN1Q9GZU1 580 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 BTG4Q9NY30 223 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 USP35Q9P2H5 1018 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 PCDHA2Q9Y5H9 948 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 X6R8D5 127 aa5.88□□□□□ -1.47
SKA2-210ENST00000584089 CCDC163A0A0D9SF12 145 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 C22orf46C9J442 243 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 F8W031 263 aaPredicted RBP5.87□□□□□ -1.47
SKA2-210ENST00000584089 H7BY64 318 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 SRSF3P84103 164 aaKnown RBP5.87□□□□□ -1.47
SKA2-210ENST00000584089 MROH9Q5TGP6 573 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 WWC2Q6AWC2 1192 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 TMEM132EQ6IEE7 984 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 STYK1Q6J9G0 422 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 CEP68Q76N32 757 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 RIOX2Q8IUF8 465 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 TEX2Q8IWB9 1127 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 ZSWIM2Q8NEG5 633 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 KCNN1Q92952 543 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 KISS1RQ969F8 398 aaPredicted RBP5.87□□□□□ -1.47
SKA2-210ENST00000584089 TRMT2BQ96GJ1 504 aaKnown RBP5.87□□□□□ -1.47
SKA2-210ENST00000584089 PEX11GQ96HA9 241 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 TMEM169Q96HH4 297 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 EXOC2Q96KP1 924 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 SIRT5Q9NXA8 310 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 NUDT5Q9UKK9 219 aa5.87□□□□□ -1.47
SKA2-210ENST00000584089 NTRK1P04629 796 aa5.86□□□□□ -1.47
SKA2-210ENST00000584089 TMEM253P0C7T8 217 aa5.86□□□□□ -1.47
SKA2-210ENST00000584089 GLDCP23378 1020 aa5.86□□□□□ -1.47
SKA2-210ENST00000584089 PLEKHN1Q494U1 663 aaPredicted RBP5.86□□□□□ -1.47
SKA2-210ENST00000584089 ZC3H14Q6PJT7 736 aaKnown RBP5.86□□□□□ -1.47
SKA2-210ENST00000584089 TMC6Q7Z403 805 aa5.86□□□□□ -1.47
SKA2-210ENST00000584089 NLRP10Q86W26 655 aa5.86□□□□□ -1.47
SKA2-210ENST00000584089 CHAMP1Q96JM3 812 aa5.86□□□□□ -1.47
SKA2-210ENST00000584089 PIF1Q9H611 641 aa5.86□□□□□ -1.47
SKA2-210ENST00000584089 DBR1Q9UK59 544 aaKnown RBP5.86□□□□□ -1.47
SKA2-210ENST00000584089 MRPS23Q9Y3D9 190 aaKnown RBP5.86□□□□□ -1.47
SKA2-210ENST00000584089 ZC3H12DA2A288 527 aaKnown RBP5.85□□□□□ -1.47
SKA2-210ENST00000584089 BLACEA4D250 179 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 MSCO60682 206 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 ZBTB7AO95365 584 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 MED14OSP0DP75 135 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 FPR2P25090 351 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 SLC6A11P48066 632 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 GPR85P60893 370 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 DLG4P78352 724 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 PRR5P85299 388 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 PKN1Q16512 942 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 KCNT2Q6UVM3 1135 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 LBX2Q6XYB7 198 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 MAMDC2Q7Z304 686 aaPredicted RBP5.85□□□□□ -1.47
SKA2-210ENST00000584089 DCP2Q8IU60 420 aaKnown RBP5.85□□□□□ -1.47
SKA2-210ENST00000584089 IFNL3Q8IZI9 196 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.85□□□□□ -1.473e-19■■■■■ 77.2
SKA2-210ENST00000584089 PTPRN2Q92932 1015 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 TSPAN17Q96FV3 270 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 CLDND1Q9NY35 253 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 MBD1Q9UIS9 605 aaPredicted RBP5.85□□□□□ -1.47
SKA2-210ENST00000584089 FBXL7Q9UJT9 491 aa5.85□□□□□ -1.47
SKA2-210ENST00000584089 COA3Q9Y2R0 106 aaPredicted RBP5.85□□□□□ -1.47
SKA2-210ENST00000584089 ETV2O00321 342 aaPredicted RBP5.84□□□□□ -1.47
SKA2-210ENST00000584089 NFIBO00712 420 aa5.84□□□□□ -1.47
SKA2-210ENST00000584089 AQP7O14520 342 aa5.84□□□□□ -1.47
SKA2-210ENST00000584089 TSPAN15O95858 294 aa5.84□□□□□ -1.47
SKA2-210ENST00000584089 C8AP07357 584 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms