RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TTLL10Q6ZVT0 673 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 TMEM151BQ8IW70 566 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 JMYQ8N9B5 988 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 ZCCHC4Q9H5U6 513 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 PDLIM7Q9NR12 457 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 BACE2Q9Y5Z0 518 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 HCFC2Q9Y5Z7 792 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 CCDC85CA6NKD9 419 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 BUB1BO60566 1050 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 SCG5P05408 212 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 DBHP09172 617 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 MAPKAPK2P49137 400 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 AFF3P51826 1226 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 PPP2R2AP63151 447 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 RBM10P98175 930 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 CYP4F3Q08477 520 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 HSP90AA2PQ14568 343 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 CBX2Q14781 532 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 VMACQ2NL98 169 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 CNKSR3Q6P9H4 555 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 PAQR3Q6TCH7 311 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 SPATC1Q76KD6 591 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 IGDCC3Q8IVU1 814 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 BTN2A2Q8WVV5 523 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 EPB41L4AQ9HCS5 686 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 DBR1Q9UK59 544 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 PCDHA5Q9Y5H7 936 aa5.96□□□□□ -1.46
PPP4R1-227ENST00000583988 CCDC163A0A0D9SF12 145 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 F8W031 263 aaPredicted RBP5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 IRS4O14654 1257 aaPredicted RBP5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 CYBBP04839 570 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 GRIA2P42262 883 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 MTERF2Q49AM1 385 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 CPNE8Q86YQ8 564 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 TMEFF1Q8IYR6 380 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 NLGN2Q8NFZ4 835 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 DACT3Q96B18 629 aaPredicted RBP5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 SPATA9Q9BWV2 254 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 PARD6AQ9NPB6 346 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 GPRC5CQ9NQ84 441 aa5.95□□□□□ -1.46
PPP4R1-227ENST00000583988 TRBV23OR9-2A0A075B6M9 112 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 ZC3H12DA2A288 527 aaKnown RBP5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 SRGAP3O43295 1099 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 TRIM13O60858 407 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 CPP00450 1065 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 CTSWP56202 376 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 CORO7P57737 925 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 SCRN1Q12765 414 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 BMS1Q14692 1282 aaKnown RBP5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 SF1Q15637 639 aaKnown RBP5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 FAM129CQ86XR2 697 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 KREMEN2Q8NCW0 462 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 FRS2Q8WU20 508 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 PWWP2AQ96N64 755 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 DNAJC7Q99615 494 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 RXFP1Q9HBX9 757 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 RWDD3Q9Y3V2 267 aa5.94□□□□□ -1.46
PPP4R1-227ENST00000583988 NPHP3-ACAD11A0A0J9YXS1 232 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 TLDC2A0PJX2 215 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 ARNTLO00327 626 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 ADCY3O60266 1144 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 THBDP07204 575 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 FGFR1P11362 822 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 PLS3P13797 630 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 PAMP19021 973 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 HOXA5P20719 270 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 GFRA1P56159 465 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 PRR5P85299 388 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 IQCEQ6IPM2 695 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 MARCH10Q8NA82 808 aaPredicted RBP5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 THAP3Q8WTV1 239 aaPredicted RBP5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 MMP19Q99542 508 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 PIF1Q9H611 641 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 ARHGEF4Q9NR80 690 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 GULP1Q9UBP9 304 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
PPP4R1-227ENST00000583988 DIAPH1O60610 1272 aaKnown RBP5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 SNRPB2P08579 225 aaKnown RBP5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 PFKLP17858 780 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 ECI1P42126 302 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 LIMS1P48059 325 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 SSRP1Q08945 709 aaKnown RBP5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 TESK1Q15569 626 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 SLC35F1Q5T1Q4 408 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 CABP7Q86V35 215 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 LZTR1Q8N653 840 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 ZBTB38Q8NAP3 1195 aaPredicted RBP5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 TMEM145Q8NBT3 493 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 USP33Q8TEY7 942 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 C1orf159Q96HA4 380 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 KCNC2Q96PR1 638 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 AARSD1Q9BTE6 412 aaKnown RBP5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 CLEC1BQ9P126 229 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 FBLN5Q9UBX5 448 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 PFDN2Q9UHV9 154 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 KDM2BQ8NHM5 1336 aa5.92□□□□□ -1.46
PPP4R1-227ENST00000583988 TRAV20A0A0B4J274 112 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
PPP4R1-227ENST00000583988 DLX3O60479 287 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms