RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 POM121CA8CG34 1229 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 GRXCR1A8MXD5 290 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 RNF223E7ERA6 249 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 ARVCFO00192 962 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 CTAGE5O15320 804 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 RNF113AO15541 343 aaKnown RBP9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 TTLL1O95922 423 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 APPP05067 770 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 ACRP10323 421 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 CSF2RAP15509 400 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 PTGS1P23219 599 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 CDK7P50613 346 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 GJA9P57773 515 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 BEX3Q00994 111 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 CNTN2Q02246 1040 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 PPIGQ13427 754 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 GNASQ5JWF2 1037 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 TMEM240Q5SV17 173 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 SLFN13Q68D06 897 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 C16orf59Q7L2K0 433 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 FAM126BQ8IXS8 530 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 CCDC144CPQ8IYA2 1237 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 ZNF444Q8N0Y2 327 aaPredicted RBP9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 PCSK9Q8NBP7 692 aaKnown RBP9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 GMCL1P1Q8NEA9 526 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 CHST13Q8NET6 341 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 MKL1Q969V6 931 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 VTI1AQ96AJ9 217 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 PBX4Q9BYU1 374 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 CHMP4BQ9H444 224 aaKnown RBP9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 ZNF576Q9H609 170 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 SPC25Q9HBM1 224 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 PRDM6Q9NQX0 595 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 MTMR4Q9NYA4 1195 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 FBXO40Q9UH90 709 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 DDX49Q9Y6V7 483 aaKnown RBP9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 SCN5AQ14524 2016 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 ASTN1O14525 1302 aa9.27□□□□□ -0.93
SMCHD1-210ENST00000583800 TMEM232C9JQI7 657 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 TLR3O15455 904 aaKnown RBP9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 TSPY3P0CV98 308 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 TSPY8P0CW00 308 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 BMP3P12645 472 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 GNAT2P19087 354 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 OAZ1P54368 228 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 CCDC129Q6ZRS4 1044 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 ZNF365Q70YC5 407 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 RASGRP2Q7LDG7 609 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 METTL3Q86U44 580 aaKnown RBP9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 IFNL3Q8IZI9 196 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 TMEM199Q8N511 208 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 TTC13Q8NBP0 860 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 PPM1EQ8WY54 764 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 GPATCH3Q96I76 525 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 AGBL1Q96MI9 1066 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 SEC62Q99442 399 aaKnown RBP9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 ACAD9Q9H845 621 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 ZNF287Q9HBT7 754 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 A1CFQ9NQ94 594 aaKnown RBP9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 RNF146Q9NTX7 359 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 RCAN3Q9UKA8 241 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 ZNF536O15090 1300 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 UMODL1Q5DID0 1318 aa9.26□□□□□ -0.93
SMCHD1-210ENST00000583800 TCF20Q9UGU0 1960 aaKnown RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 CD4P01730 458 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 OATP04181 439 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 ZFYP08048 801 aaPredicted RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 CYP2C18P33260 490 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 STAT2P52630 851 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 SNAP25P60880 206 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 PRR20EP86478 221 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 PRR20CP86479 221 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 PRR20DP86480 221 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 PRR20BP86481 221 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 PRR20AP86496 221 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 TFAP4Q01664 338 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 IKQ13123 557 aaPredicted RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 RASIP1Q5U651 963 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 DIEXFQ68CQ4 756 aaKnown RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 PSRC1Q6PGN9 363 aaPredicted RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 CXCL17Q6UXB2 119 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 NOL8Q76FK4 1167 aaKnown RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 TLK2Q86UE8 772 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 FAM133AQ8N9E0 248 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 NEDD1Q8NHV4 660 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 NLRP7Q8WX94 980 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 SYMPKQ92797 1274 aaKnown RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 GAS2L1Q99501 681 aaPredicted RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 PRDM12Q9H4Q4 367 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 LIMD1Q9UGP4 676 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 SYNPO2Q9UMS6 1093 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 GNEQ9Y223 722 aaKnown RBP9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 ADGRG1Q9Y653 693 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 TANC1Q9C0D5 1861 aa9.25□□□□□ -0.93
SMCHD1-210ENST00000583800 ALAS1P13196 640 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 MCCP23508 829 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 ABL2P42684 1182 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 SLC1A4P43007 532 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms