RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 A6NJR5 290 aa14.52□□□□□ -0.09
TOP3A-215ENST00000583328 PTGISQ16647 500 aa14.52□□□□□ -0.09
TOP3A-215ENST00000583328 SYDE2Q5VT97 1194 aa14.52□□□□□ -0.09
TOP3A-215ENST00000583328 ALYREFQ86V81 257 aaKnown RBP14.52□□□□□ -0.09
TOP3A-215ENST00000583328 CAGE1Q8TC20 777 aa14.52□□□□□ -0.09
TOP3A-215ENST00000583328 SCFD2Q8WU76 684 aa14.52□□□□□ -0.09
TOP3A-215ENST00000583328 CD320Q9NPF0 282 aa14.52□□□□□ -0.09
TOP3A-215ENST00000583328 INCENPQ9NQS7 918 aa14.52□□□□□ -0.09
TOP3A-215ENST00000583328 RANBP6O60518 1105 aaKnown RBP14.51□□□□□ -0.09
TOP3A-215ENST00000583328 TXNP10599 105 aaKnown RBP14.51□□□□□ -0.09
TOP3A-215ENST00000583328 WDR5P61964 334 aaKnown RBP14.51□□□□□ -0.09
TOP3A-215ENST00000583328 CTDSPL2Q05D32 466 aa14.51□□□□□ -0.09
TOP3A-215ENST00000583328 BTNL9Q6UXG8 535 aa14.51□□□□□ -0.09
TOP3A-215ENST00000583328 SLC30A10Q6XR72 485 aa14.51□□□□□ -0.09
TOP3A-215ENST00000583328 RNF207Q6ZRF8 634 aa14.51□□□□□ -0.09
TOP3A-215ENST00000583328 TMCO2Q7Z6W1 182 aaPredicted RBP14.51□□□□□ -0.09
TOP3A-215ENST00000583328 GJD3Q8N144 294 aa14.51□□□□□ -0.09
TOP3A-215ENST00000583328 AFAP1L1Q8TED9 768 aa14.51□□□□□ -0.09
TOP3A-215ENST00000583328 UBE2ZQ9H832 354 aaPredicted RBP14.51□□□□□ -0.09
TOP3A-215ENST00000583328 GPCPD1Q9NPB8 672 aa14.51□□□□□ -0.09
TOP3A-215ENST00000583328 MTUS1Q9ULD2 1270 aa14.51□□□□□ -0.09
TOP3A-215ENST00000583328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
TOP3A-215ENST00000583328 FRMPD2Q68DX3 1309 aaPredicted RBP14.5□□□□□ -0.09
TOP3A-215ENST00000583328 B4DLN1 442 aa14.5□□□□□ -0.09
TOP3A-215ENST00000583328 SELPP16109 830 aa14.5□□□□□ -0.09
TOP3A-215ENST00000583328 MRPL12P52815 198 aaKnown RBP14.5□□□□□ -0.09
TOP3A-215ENST00000583328 TGS1Q96RS0 853 aaKnown RBP14.5□□□□□ -0.09
TOP3A-215ENST00000583328 CRBNQ96SW2 442 aa14.5□□□□□ -0.09
TOP3A-215ENST00000583328 RAD9AQ99638 391 aa14.5□□□□□ -0.09
TOP3A-215ENST00000583328 SUGCTQ9HAC7 445 aa14.5□□□□□ -0.09
TOP3A-215ENST00000583328 MYH7P12883 1935 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.49□□□□□ -0.09
TOP3A-215ENST00000583328 PRR33A8MZF0 331 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 PARNO95453 639 aaKnown RBP14.49□□□□□ -0.09
TOP3A-215ENST00000583328 SSTR3P32745 418 aaPredicted RBP14.49□□□□□ -0.09
TOP3A-215ENST00000583328 ERVK-21P61565 698 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 RPS6P62753 249 aaKnown RBP14.49□□□□□ -0.09
TOP3A-215ENST00000583328 DEFB103AP81534 67 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 GPNMBQ14956 572 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 ZMYM1Q5SVZ6 1142 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 CNKSR3Q6P9H4 555 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 LRRC8DQ7L1W4 858 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 DNERQ8NFT8 737 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 CLEC4DQ8WXI8 215 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 UIMC1Q96RL1 719 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 FSD1Q9BTV5 496 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 PNMA2Q9UL42 364 aa14.49□□□□□ -0.09
TOP3A-215ENST00000583328 SCN5AQ14524 2016 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 ABHD14A-ACY1A0A1B0GW23 586 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 GJB5O95377 273 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 KCNA5P22460 613 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 EDNRBP24530 442 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 LEXMQ3ZCV2 418 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 GDF6Q6KF10 455 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-215ENST00000583328 FAM117BQ6P1L5 589 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 FAM178BQ8IXR5 827 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-215ENST00000583328 AFG1LQ8WV93 481 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 TOMM22Q9NS69 142 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 LRRC37A2A6NM11 1700 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 XIRP2A4UGR9 3374 aa14.48□□□□□ -0.09
TOP3A-215ENST00000583328 LINC01553A4QN01 128 aa14.47□□□□□ -0.09
TOP3A-215ENST00000583328 EFCAB14O75071 495 aa14.47□□□□□ -0.09
TOP3A-215ENST00000583328 ARIH2O95376 493 aa14.47□□□□□ -0.09
TOP3A-215ENST00000583328 TOP1P11387 765 aaKnown RBP14.47□□□□□ -0.09
TOP3A-215ENST00000583328 NOVP48745 357 aa14.47□□□□□ -0.09
TOP3A-215ENST00000583328 IKBKEQ14164 716 aa14.47□□□□□ -0.09
TOP3A-215ENST00000583328 SESTD1Q86VW0 696 aa14.47□□□□□ -0.09
TOP3A-215ENST00000583328 TMEM47Q9BQJ4 181 aa14.47□□□□□ -0.09
TOP3A-215ENST00000583328 DCTPP1Q9H773 170 aa14.47□□□□□ -0.09
TOP3A-215ENST00000583328 MUC6Q6W4X9 2439 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 PIEZO1Q92508 2521 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 SCN10AQ9Y5Y9 1956 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 NBNO60934 754 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 GH1P01241 217 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 CXCL10P02778 98 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 MMP3P08254 477 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 CKBP12277 381 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 ALADP13716 330 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 CASTP20810 708 aaKnown RBP14.46□□□□□ -0.09
TOP3A-215ENST00000583328 LY6KQ17RY6 165 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 CSPP1Q1MSJ5 1256 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 RRP12Q5JTH9 1297 aaKnown RBP14.46□□□□□ -0.09
TOP3A-215ENST00000583328 PTCRAQ6ISU1 281 aaPredicted RBP14.46□□□□□ -0.09
TOP3A-215ENST00000583328 SEPT14Q6ZU15 432 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 CHST3Q7LGC8 479 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 DHX38Q92620 1227 aaKnown RBP14.46□□□□□ -0.09
TOP3A-215ENST00000583328 CTAGE1Q96RT6 745 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 ANAPC4Q9UJX5 808 aa14.46□□□□□ -0.09
TOP3A-215ENST00000583328 TET1Q8NFU7 2136 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 TTC41PQ6P2S7 1318 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 ORC4O43929 436 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 IL9P15248 144 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 RBL2Q08999 1139 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 TCTN1Q2MV58 587 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 CCDC62Q6P9F0 684 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 C7orf31Q8N865 590 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 FBXO22Q8NEZ5 403 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 KAT2BQ92831 832 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 ALG1Q9BT22 464 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms