RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 RAVER2Q9HCJ3 691 aaKnown RBP20.76■□□□□ 0.91
SNX11-212ENST00000583320 ZSWIM5Q9P217 1185 aa20.76■□□□□ 0.91
SNX11-212ENST00000583320 PCDHA11Q9Y5I1 949 aa20.76■□□□□ 0.91
SNX11-212ENST00000583320 MTCH2Q9Y6C9 303 aa20.76■□□□□ 0.91
SNX11-212ENST00000583320 DDX49Q9Y6V7 483 aaKnown RBP20.76■□□□□ 0.91
SNX11-212ENST00000583320 ATP2A1O14983 1001 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 KDM4AO75164 1064 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 CNTN2Q02246 1040 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 SART3Q15020 963 aaKnown RBP20.75■□□□□ 0.91
SNX11-212ENST00000583320 BRF1Q92994 677 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 SCLYQ96I15 445 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 CERS4Q9HA82 394 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 C11orf16Q9NQ32 467 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 TPCN1Q9ULQ1 816 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 SLC4A7Q9Y6M7 1214 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 BRWD1Q9NSI6 2320 aa20.75■□□□□ 0.91
SNX11-212ENST00000583320 SH2B2O14492 632 aaPredicted RBP20.74■□□□□ 0.91
SNX11-212ENST00000583320 B4GALT4O60513 344 aa20.74■□□□□ 0.91
SNX11-212ENST00000583320 ARHGEF15O94989 841 aa20.74■□□□□ 0.91
SNX11-212ENST00000583320 LIFRP42702 1097 aa20.74■□□□□ 0.91
SNX11-212ENST00000583320 PSMC6P62333 389 aa20.74■□□□□ 0.91
SNX11-212ENST00000583320 ME3Q16798 604 aa20.74■□□□□ 0.91
SNX11-212ENST00000583320 NOL8Q76FK4 1167 aaKnown RBP20.74■□□□□ 0.91
SNX11-212ENST00000583320 TMTC2Q8N394 836 aa20.74■□□□□ 0.91
SNX11-212ENST00000583320 ZNF274Q96GC6 653 aaPredicted RBP20.74■□□□□ 0.91
SNX11-212ENST00000583320 INCENPQ9NQS7 918 aa20.74■□□□□ 0.91
SNX11-212ENST00000583320 TOMM22Q9NS69 142 aa20.74■□□□□ 0.91
SNX11-212ENST00000583320 ZBBXA8MT70 800 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 F5H6K3 240 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 CA3P07451 260 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 KLRC3Q07444 240 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 ITGA7Q13683 1181 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 TTLL4Q14679 1199 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 AAK1Q2M2I8 961 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 RRP12Q5JTH9 1297 aaKnown RBP20.73■□□□□ 0.91
SNX11-212ENST00000583320 TMEM63BQ5T3F8 832 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 SGMS1Q86VZ5 419 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 ANKRD35Q8N283 1001 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 IGDCC4Q8TDY8 1250 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 LRRC2Q9BYS8 371 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 CIZ1Q9ULV3 898 aaPredicted RBP20.73■□□□□ 0.91
SNX11-212ENST00000583320 GNEQ9Y223 722 aaKnown RBP20.73■□□□□ 0.91
SNX11-212ENST00000583320 HCN4Q9Y3Q4 1203 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 SCN5AQ14524 2016 aa20.73■□□□□ 0.91
SNX11-212ENST00000583320 FAM86C2PA6NEL3 165 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 ATP2A2P16615 1042 aaKnown RBP20.72■□□□□ 0.91
SNX11-212ENST00000583320 RASA1P20936 1047 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 TNFAIP2Q03169 654 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 CCDC178Q5BJE1 867 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 CHST3Q7LGC8 479 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 TLK2Q86UE8 772 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 PRPF38AQ8NAV1 312 aaKnown RBP20.72■□□□□ 0.91
SNX11-212ENST00000583320 KIFC2Q96AC6 838 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 AGBL1Q96MI9 1066 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 SLC38A10Q9HBR0 1119 aa20.72■□□□□ 0.91
SNX11-212ENST00000583320 ARIH1Q9Y4X5 557 aaPredicted RBP20.72■□□□□ 0.91
SNX11-212ENST00000583320 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.72■□□□□ 0.91
SNX11-212ENST00000583320 MYH4Q9Y623 1939 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 ERICH2A1L162 156 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 IFIT3O14879 490 aaKnown RBP20.71■□□□□ 0.91
SNX11-212ENST00000583320 TLL1O43897 1013 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 PFKFB2O60825 505 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 POU3F3P20264 500 aaPredicted RBP20.71■□□□□ 0.91
SNX11-212ENST00000583320 DDIT3P35638 169 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 FSCN1Q16658 493 aaKnown RBP20.71■□□□□ 0.91
SNX11-212ENST00000583320 TMEM67Q5HYA8 995 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 IQCA1Q86XH1 822 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 STK11IPQ8N1F8 1099 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 UBAC1Q9BSL1 405 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 MKNK2Q9HBH9 465 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 HOMER2Q9NSB8 354 aa20.71■□□□□ 0.91
SNX11-212ENST00000583320 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.91
SNX11-212ENST00000583320 SOWAHBA6NEL2 793 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 RANBP6O60518 1105 aaKnown RBP20.7■□□□□ 0.9
SNX11-212ENST00000583320 ZBED4O75132 1171 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 LARGE1O95461 756 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 SMPD1P17405 629 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 RCAN1P53805 252 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 TMEM31Q5JXX7 168 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 SPRED2Q7Z698 418 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 ZNF444Q8N0Y2 327 aaPredicted RBP20.7■□□□□ 0.9
SNX11-212ENST00000583320 FAM133AQ8N9E0 248 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 LY9Q9HBG7 655 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 TCP11L1Q9NUJ3 509 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 NYAP2Q9P242 653 aa20.7■□□□□ 0.9
SNX11-212ENST00000583320 CABYRO75952 493 aa20.69■□□□□ 0.9
SNX11-212ENST00000583320 APOBRQ0VD83 1088 aa20.69■□□□□ 0.9
SNX11-212ENST00000583320 CHST13Q8NET6 341 aa20.69■□□□□ 0.9
SNX11-212ENST00000583320 GTF3C6Q969F1 213 aa20.69■□□□□ 0.9
SNX11-212ENST00000583320 ZSCAN10Q96SZ4 725 aaPredicted RBP20.69■□□□□ 0.9
SNX11-212ENST00000583320 LARP6Q9BRS8 491 aaKnown RBP20.69■□□□□ 0.9
SNX11-212ENST00000583320 SLKQ9H2G2 1235 aaPredicted RBP20.69■□□□□ 0.9
SNX11-212ENST00000583320 PDGFCQ9NRA1 345 aa20.69■□□□□ 0.9
SNX11-212ENST00000583320 LCTP09848 1927 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 IGKV6D-41A0A0C4DH26 115 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 PRDM1O75626 825 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 PDIA3P30101 505 aaKnown RBP20.68■□□□□ 0.9
SNX11-212ENST00000583320 WTAPQ15007 396 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 SEC23AQ15436 765 aa20.68■□□□□ 0.9
SNX11-212ENST00000583320 RPUSD2Q8IZ73 545 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms