RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	BSN	Q9UPA5	3926 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	CELSR1	Q9NYQ6	3014 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	URB1	O60287	2271 aa	Known RBP	6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	ASTN1	O14525	1302 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	SNAI1	O95863	264 aa	Predicted RBP	6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	DCN	P07585	359 aa	Known RBP	6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	FCER1A	P12319	257 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	CTNNB1	P35222	781 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	BMPR1A	P36894	532 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	NRIP1	P48552	1158 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	IKBKE	Q14164	716 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	TCTN1	Q2MV58	587 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	STPG1	Q5TH74	334 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	USP17L2	Q6R6M4	530 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	CELF5	Q8N6W0	485 aa	Known RBP	6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	MAGEB6	Q8N7X4	407 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	VN1R2	Q8NFZ6	395 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	PJA1	Q8NG27	643 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	CLP1	Q92989	425 aa	Known RBP	6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	P2RX5	Q93086	422 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	CDCA7L	Q96GN5	454 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	CDCA3	Q99618	268 aa	Predicted RBP	6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	BCAS3	Q9H6U6	928 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	GPR108	Q9NPR9	543 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	USP40	Q9NVE5	1235 aa		6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.37	□□□□□ -1.39
MSI2-216	ENST00000582772	LAMTOR5	O43504	91 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	CEACAM1	P13688	526 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	HOXB8	P17481	243 aa	Predicted RBP	6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	SP100	P23497	879 aa	Predicted RBP	6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	MAGEA9	P43362	315 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	GYG1	P46976	350 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	SPECC1	Q5M775	1068 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	SYCE2	Q6PIF2	218 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	FBXO33	Q7Z6M2	555 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	TDRD5	Q8NAT2	981 aa	Known RBP	6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	CAGE1	Q8TC20	777 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	RASGRP4	Q8TDF6	673 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	YME1L1	Q96TA2	773 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	PLA2G12B	Q9BX93	195 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	POMK	Q9H5K3	350 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	PRMT8	Q9NR22	394 aa	Predicted RBP	6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	KLK13	Q9UKR3	277 aa		6.36	□□□□□ -1.39
MSI2-216	ENST00000582772	SPAG17	Q6Q759	2223 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	ADGRG4	Q8IZF6	3080 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	F8	P00451	2351 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772		A0A087WV48	116 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772		F5H6K3	240 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	CAPN9	O14815	690 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	GIPC1	O14908	333 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	AMH	P03971	560 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	CSF1R	P07333	972 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	CFH	P08603	1231 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	SRGAP2B	P0DMP2	458 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	PLCD1	P51178	756 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	CFHR1	Q03591	330 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	TRIM26	Q12899	539 aa	Predicted RBP	6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	FSCN1	Q16658	493 aa	Known RBP	6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	CCDC144B	Q3MJ40	725 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	AASDH	Q4L235	1098 aa	Predicted RBP	6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	NAALADL2	Q58DX5	795 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	ANKRD54	Q6NXT1	300 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	ZNF467	Q7Z7K2	595 aa	Predicted RBP	6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	MB21D1	Q8N884	522 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	TOP1MT	Q969P6	601 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	ABHD16B	Q9H3Z7	469 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	TSHZ2	Q9NRE2	1034 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	CHPF2	Q9P2E5	772 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	LIMD1	Q9UGP4	676 aa		6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	HERC5	Q9UII4	1024 aa	Known RBP	6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	UTP20	O75691	2785 aa	Known RBP	6.35	□□□□□ -1.39
MSI2-216	ENST00000582772	AHCTF1	Q8WYP5	2266 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	HYAL3	O43820	417 aa	Predicted RBP	6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	ZEB2	O60315	1214 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	NBN	O60934	754 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	VCAM1	P19320	739 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	CSRP1	P21291	193 aa	Known RBP	6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	PSMC6	P62333	389 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	BEX3	Q00994	111 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	CSTF1	Q05048	431 aa	Known RBP	6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	ACVR2B	Q13705	512 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	CCDC155	Q8N6L0	562 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	SPIRE2	Q8WWL2	714 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	RC3H2	Q9HBD1	1191 aa	Known RBP	6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	DDX4	Q9NQI0	724 aa	Known RBP	6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	BABAM1	Q9NWV8	329 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	DKK4	Q9UBT3	224 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	ZHX1	Q9UKY1	873 aa	Predicted RBP	6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	PLAGL2	Q9UPG8	496 aa		6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	GNE	Q9Y223	722 aa	Known RBP	6.34	□□□□□ -1.39
MSI2-216	ENST00000582772	PCNX2	A6NKB5	2137 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	FAM196B	A6NMK8	535 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	STK25	O00506	426 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	U2SURP	O15042	1029 aa	Known RBP	6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	WDR46	O15213	610 aa	Known RBP	6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	TREH	O43280	583 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	LGR5	O75473	907 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	SEC24B	O95487	1268 aa		6.33	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms