RNA–Protein interactions for RNA: ENST00000582547.5

ATG13-229, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-229ENST00000582547 SMARCA1P28370 1054 aa18.71■□□□□ 0.59
ATG13-229ENST00000582547 MCM5P33992 734 aa18.71■□□□□ 0.59
ATG13-229ENST00000582547 TMTC2Q8N394 836 aa18.71■□□□□ 0.59
ATG13-229ENST00000582547 ANO2Q9NQ90 1003 aa18.71■□□□□ 0.59
ATG13-229ENST00000582547 PCDHA1Q9Y5I3 950 aa18.71■□□□□ 0.59
ATG13-229ENST00000582547 GRIN2DO15399 1336 aa18.71■□□□□ 0.59
ATG13-229ENST00000582547 PNMA6FA0A0J9YX94 578 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 SH2B2O14492 632 aaPredicted RBP18.7■□□□□ 0.58
ATG13-229ENST00000582547 PRC1O43663 620 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 CD4P01730 458 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 LIFRP42702 1097 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 CPT1AP50416 773 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 COL9A3Q14050 684 aaPredicted RBP18.7■□□□□ 0.58
ATG13-229ENST00000582547 PPP2R5BQ15173 497 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 CCDC62Q6P9F0 684 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 CASC1Q6TDU7 716 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 VTI1AQ96AJ9 217 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 PIGSQ96S52 555 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 RMDN3Q96TC7 470 aa18.7■□□□□ 0.58
ATG13-229ENST00000582547 CDC45O75419 566 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 TIMP1P01033 207 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 RAG1P15918 1043 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 ITGA7Q13683 1181 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 TTLL4Q14679 1199 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 TSGA10IPQ3SY00 556 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 ZNF654Q8IZM8 581 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 SPZ1Q9BXG8 430 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
ATG13-229ENST00000582547 PXMP2Q9NR77 195 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 SCN10AQ9Y5Y9 1956 aa18.69■□□□□ 0.58
ATG13-229ENST00000582547 A6NJR5 290 aa18.68■□□□□ 0.58
ATG13-229ENST00000582547 TLR3O15455 904 aaKnown RBP18.68■□□□□ 0.58
ATG13-229ENST00000582547 ARIH2O95376 493 aa18.68■□□□□ 0.58
ATG13-229ENST00000582547 CFBP00751 764 aa18.68■□□□□ 0.58
ATG13-229ENST00000582547 TXNP10599 105 aaKnown RBP18.68■□□□□ 0.58
ATG13-229ENST00000582547 KIF5BP33176 963 aa18.68■□□□□ 0.58
ATG13-229ENST00000582547 PURAQ00577 322 aaKnown RBP18.68■□□□□ 0.58
ATG13-229ENST00000582547 SHHQ15465 462 aa18.68■□□□□ 0.58
ATG13-229ENST00000582547 STXBP2Q15833 593 aa18.68■□□□□ 0.58
ATG13-229ENST00000582547 RNF20Q5VTR2 975 aa18.68■□□□□ 0.58
ATG13-229ENST00000582547 CCDC136Q96JN2 1154 aa18.68■□□□□ 0.58
ATG13-229ENST00000582547 LAMA2P24043 3122 aaKnown RBP18.67■□□□□ 0.58
ATG13-229ENST00000582547 KPNA6O60684 536 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 EIF3JO75822 258 aaKnown RBP18.67■□□□□ 0.58
ATG13-229ENST00000582547 FPGSQ05932 587 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 C9orf50Q5SZB4 431 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 ARHGEF16Q5VV41 709 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 MFSD5Q6N075 450 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 SGMS1Q86VZ5 419 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 HOMER1Q86YM7 354 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 OR6J1Q8NGC5 347 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
ATG13-229ENST00000582547 LZTS2Q9BRK4 669 aa18.67■□□□□ 0.58
ATG13-229ENST00000582547 NR3C2P08235 984 aa18.66■□□□□ 0.58
ATG13-229ENST00000582547 CALM1P0DP23 149 aa18.66■□□□□ 0.58
ATG13-229ENST00000582547 CALM2P0DP24 149 aa18.66■□□□□ 0.58
ATG13-229ENST00000582547 CALM3P0DP25 149 aa18.66■□□□□ 0.58
ATG13-229ENST00000582547 GNAQP50148 359 aa18.66■□□□□ 0.58
ATG13-229ENST00000582547 EPHB4P54760 987 aa18.66■□□□□ 0.58
ATG13-229ENST00000582547 BRDTQ58F21 947 aaPredicted RBP18.66■□□□□ 0.58
ATG13-229ENST00000582547 COPS5Q92905 334 aa18.66■□□□□ 0.58
ATG13-229ENST00000582547 PDCD2LQ9BRP1 358 aa18.66■□□□□ 0.58
ATG13-229ENST00000582547 CCDC69A6NI79 296 aa18.65■□□□□ 0.58
ATG13-229ENST00000582547 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
ATG13-229ENST00000582547 EXOSC10Q01780 885 aaKnown RBP18.65■□□□□ 0.58
ATG13-229ENST00000582547 FAM109BQ6ICB4 259 aaPredicted RBP18.65■□□□□ 0.58
ATG13-229ENST00000582547 EMID1Q96A84 441 aaPredicted RBP18.65■□□□□ 0.58
ATG13-229ENST00000582547 MTG1Q9BT17 334 aaPredicted RBP18.65■□□□□ 0.58
ATG13-229ENST00000582547 MYL10Q9BUA6 226 aa18.65■□□□□ 0.58
ATG13-229ENST00000582547 GCOM1H8Y6P7 765 aaPredicted RBP18.64■□□□□ 0.57
ATG13-229ENST00000582547 POLR2MP0CAP2 368 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 HOXA13P31271 388 aaPredicted RBP18.64■□□□□ 0.57
ATG13-229ENST00000582547 PSMC6P62333 389 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 ARHGAP1Q07960 439 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 PGM5Q15124 567 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 SEPT14Q6ZU15 432 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 VSIG10LQ86VR7 867 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 KCNB2Q92953 911 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 NEK1Q96PY6 1258 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 ALDH8A1Q9H2A2 487 aaPredicted RBP18.64■□□□□ 0.57
ATG13-229ENST00000582547 DDX41Q9UJV9 622 aaKnown RBP18.64■□□□□ 0.57
ATG13-229ENST00000582547 FRMPD4Q14CM0 1322 aa18.64■□□□□ 0.57
ATG13-229ENST00000582547 B4GALT4O60513 344 aa18.63■□□□□ 0.57
ATG13-229ENST00000582547 RGS20O76081 388 aa18.63■□□□□ 0.57
ATG13-229ENST00000582547 GH1P01241 217 aa18.63■□□□□ 0.57
ATG13-229ENST00000582547 MYL3P08590 195 aa18.63■□□□□ 0.57
ATG13-229ENST00000582547 NFXL1Q6ZNB6 911 aa18.63■□□□□ 0.57
ATG13-229ENST00000582547 RASEFQ8IZ41 740 aa18.63■□□□□ 0.57
ATG13-229ENST00000582547 SRBD1Q8N5C6 995 aaKnown RBP18.63■□□□□ 0.57
ATG13-229ENST00000582547 RRP36Q96EU6 259 aaKnown RBP18.63■□□□□ 0.57
ATG13-229ENST00000582547 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
ATG13-229ENST00000582547 PLEKHA8P1O95397 391 aa18.62■□□□□ 0.57
ATG13-229ENST00000582547 SMAD3P84022 425 aaKnown RBP18.62■□□□□ 0.57
ATG13-229ENST00000582547 PTPN11Q06124 597 aaPredicted RBP18.62■□□□□ 0.57
ATG13-229ENST00000582547 PPIGQ13427 754 aaKnown RBP eCLIP18.62■□□□□ 0.57
ATG13-229ENST00000582547 KRT32Q14532 448 aa18.62■□□□□ 0.57
ATG13-229ENST00000582547 LY6KQ17RY6 165 aa18.62■□□□□ 0.57
ATG13-229ENST00000582547 NFRKBQ6P4R8 1299 aa18.62■□□□□ 0.57
ATG13-229ENST00000582547 KCNV1Q6PIU1 500 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms