RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 COL20A1Q9P218 1284 aa25.99■■□□□ 1.75
CASC3-207ENST00000581849 A6NJR5 290 aa25.98■■□□□ 1.75
CASC3-207ENST00000581849 HSD17B4P51659 736 aa25.98■■□□□ 1.75
CASC3-207ENST00000581849 TROAPQ12815 778 aa25.98■■□□□ 1.75
CASC3-207ENST00000581849 ZNF697Q5TEC3 545 aa25.98■■□□□ 1.75
CASC3-207ENST00000581849 MB21D2Q8IYB1 491 aaPredicted RBP25.98■■□□□ 1.75
CASC3-207ENST00000581849 TAAR1Q96RJ0 339 aa25.98■■□□□ 1.75
CASC3-207ENST00000581849 RMDN3Q96TC7 470 aa25.98■■□□□ 1.75
CASC3-207ENST00000581849 TAF6LQ9Y6J9 622 aa25.98■■□□□ 1.75
CASC3-207ENST00000581849 SCN10AQ9Y5Y9 1956 aa25.98■■□□□ 1.75
CASC3-207ENST00000581849 KIAA1217Q5T5P2 1943 aa25.97■■□□□ 1.75
CASC3-207ENST00000581849 TXNP10599 105 aaKnown RBP25.97■■□□□ 1.75
CASC3-207ENST00000581849 STXBP2Q15833 593 aa25.97■■□□□ 1.75
CASC3-207ENST00000581849 CENPQQ7L2Z9 268 aaPredicted RBP25.97■■□□□ 1.75
CASC3-207ENST00000581849 MAP3K14Q99558 947 aa25.97■■□□□ 1.75
CASC3-207ENST00000581849 MTG1Q9BT17 334 aaPredicted RBP25.97■■□□□ 1.75
CASC3-207ENST00000581849 GPHNQ9NQX3 736 aaPredicted RBP25.97■■□□□ 1.75
CASC3-207ENST00000581849 TMEM265A0A087WTH1 108 aa25.96■■□□□ 1.75
CASC3-207ENST00000581849 TMEM67Q5HYA8 995 aa25.96■■□□□ 1.75
CASC3-207ENST00000581849 CCDC62Q6P9F0 684 aa25.96■■□□□ 1.75
CASC3-207ENST00000581849 CATIPQ7Z7H3 387 aa25.96■■□□□ 1.75
CASC3-207ENST00000581849 IGDCC4Q8TDY8 1250 aa25.96■■□□□ 1.75
CASC3-207ENST00000581849 OPLAHO14841 1288 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 PPP1R11O60927 126 aaPredicted RBP25.95■■□□□ 1.74
CASC3-207ENST00000581849 ANTXR2P58335 489 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 PSMC6P62333 389 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 BMP2KLQ5H9B9 411 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 PSRC1Q6PGN9 363 aaPredicted RBP25.95■■□□□ 1.74
CASC3-207ENST00000581849 ESYT1Q9BSJ8 1104 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 PPP1R12CQ9BZL4 782 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 LSG1Q9H089 658 aaKnown RBP25.95■■□□□ 1.74
CASC3-207ENST00000581849 ALDH8A1Q9H2A2 487 aaPredicted RBP25.95■■□□□ 1.74
CASC3-207ENST00000581849 HIPK3Q9H422 1215 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 PXMP2Q9NR77 195 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 PCDHA1Q9Y5I3 950 aa25.95■■□□□ 1.74
CASC3-207ENST00000581849 B4GALT4O60513 344 aa25.94■■□□□ 1.74
CASC3-207ENST00000581849 EIF3JO75822 258 aaKnown RBP25.94■■□□□ 1.74
CASC3-207ENST00000581849 CFBP00751 764 aa25.94■■□□□ 1.74
CASC3-207ENST00000581849 MYL3P08590 195 aa25.94■■□□□ 1.74
CASC3-207ENST00000581849 SUPT20HL2P0C7V6 817 aa25.94■■□□□ 1.74
CASC3-207ENST00000581849 ARHGEF16Q5VV41 709 aa25.94■■□□□ 1.74
CASC3-207ENST00000581849 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.94■■□□□ 1.741e-12■□□□□ 9.9
CASC3-207ENST00000581849 SENP2Q9HC62 589 aa25.94■■□□□ 1.74
CASC3-207ENST00000581849 DDAH1O94760 285 aa25.93■■□□□ 1.74
CASC3-207ENST00000581849 ARIH2O95376 493 aa25.93■■□□□ 1.74
CASC3-207ENST00000581849 CSF2RAP15509 400 aa25.93■■□□□ 1.74
CASC3-207ENST00000581849 PTPN11Q06124 597 aaPredicted RBP25.93■■□□□ 1.74
CASC3-207ENST00000581849 SLC35G1Q2M3R5 365 aa25.93■■□□□ 1.74
CASC3-207ENST00000581849 NFRKBQ6P4R8 1299 aa25.93■■□□□ 1.74
CASC3-207ENST00000581849 NOC4LQ9BVI4 516 aaKnown RBP25.93■■□□□ 1.74
CASC3-207ENST00000581849 COL6A3P12111 3177 aa25.93■■□□□ 1.74
CASC3-207ENST00000581849 PNMA6FA0A0J9YX94 578 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.92■■□□□ 1.74
CASC3-207ENST00000581849 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.92■■□□□ 1.74
CASC3-207ENST00000581849 CYTH3O43739 400 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 GH1P01241 217 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 NR3C2P08235 984 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 SMARCA1P28370 1054 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 TMEM240Q5SV17 173 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 RASIP1Q5U651 963 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 CASC1Q6TDU7 716 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 C16orf59Q7L2K0 433 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 CHST3Q7LGC8 479 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 TMTC2Q8N394 836 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 COPS5Q92905 334 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 TMEM87BQ96K49 555 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 GUCD1Q96NT3 240 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 PIGSQ96S52 555 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 TRPV6Q9H1D0 765 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 IL23AQ9NPF7 189 aa25.92■■□□□ 1.74
CASC3-207ENST00000581849 BAZ2BQ9UIF8 2168 aaKnown RBP25.91■■□□□ 1.74
CASC3-207ENST00000581849 KIF5BP33176 963 aa25.91■■□□□ 1.74
CASC3-207ENST00000581849 CYP2C18P33260 490 aa25.91■■□□□ 1.74
CASC3-207ENST00000581849 MCM5P33992 734 aa25.91■■□□□ 1.74
CASC3-207ENST00000581849 SEPT14Q6ZU15 432 aa25.91■■□□□ 1.74
CASC3-207ENST00000581849 HOMER1Q86YM7 354 aa25.91■■□□□ 1.74
CASC3-207ENST00000581849 EMID1Q96A84 441 aaPredicted RBP25.91■■□□□ 1.74
CASC3-207ENST00000581849 PDCD2LQ9BRP1 358 aa25.91■■□□□ 1.74
CASC3-207ENST00000581849 LY9Q9HBG7 655 aa25.91■■□□□ 1.74
CASC3-207ENST00000581849 EIF2AK2P19525 551 aaKnown RBP25.9■■□□□ 1.74
CASC3-207ENST00000581849 ARHGAP1Q07960 439 aa25.9■■□□□ 1.74
CASC3-207ENST00000581849 NECTIN1Q15223 517 aa25.9■■□□□ 1.74
CASC3-207ENST00000581849 ZNF654Q8IZM8 581 aa25.9■■□□□ 1.74
CASC3-207ENST00000581849 SPZ1Q9BXG8 430 aa25.9■■□□□ 1.74
CASC3-207ENST00000581849 SLC27A2O14975 620 aa25.89■■□□□ 1.74
CASC3-207ENST00000581849 PRC1O43663 620 aa25.89■■□□□ 1.74
CASC3-207ENST00000581849 KCNV1Q6PIU1 500 aa25.89■■□□□ 1.74
CASC3-207ENST00000581849 CTCFLQ8NI51 663 aaPredicted RBP25.89■■□□□ 1.74
CASC3-207ENST00000581849 LZTS2Q9BRK4 669 aa25.89■■□□□ 1.74
CASC3-207ENST00000581849 MTIF3Q9H2K0 278 aaKnown RBP25.89■■□□□ 1.74
CASC3-207ENST00000581849 SEMA6BQ9H3T3 888 aa25.89■■□□□ 1.74
CASC3-207ENST00000581849 DDX41Q9UJV9 622 aaKnown RBP25.89■■□□□ 1.74
CASC3-207ENST00000581849 GCOM1H8Y6P7 765 aaPredicted RBP25.88■■□□□ 1.73
CASC3-207ENST00000581849 MMP3P08254 477 aa25.88■■□□□ 1.73
CASC3-207ENST00000581849 POLR2MP0CAP2 368 aa25.88■■□□□ 1.73
CASC3-207ENST00000581849 LIFRP42702 1097 aa25.88■■□□□ 1.73
CASC3-207ENST00000581849 GNAQP50148 359 aa25.88■■□□□ 1.73
CASC3-207ENST00000581849 NBPF20Q3BBV1 942 aa25.88■■□□□ 1.73
CASC3-207ENST00000581849 CREB3L3Q68CJ9 461 aa25.88■■□□□ 1.73
CASC3-207ENST00000581849 HERVK_113Q902F9 699 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms