RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 KIAA0825Q8IV33 1275 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 KISS1RQ969F8 398 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 SYT3Q9BQG1 590 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 MENTQ9BUN1 341 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 TSC22D4Q9Y3Q8 395 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 ACVRL1P37023 503 aa7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 TCEAL1Q15170 157 aa7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 CDSNQ15517 529 aa7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 C9orf131Q5VYM1 1079 aa7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 ZFPM1Q8IX07 1006 aa7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 BCL2L13Q9BXK5 485 aa7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 PCDH18Q9HCL0 1135 aa7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 ZNF214Q9UL59 606 aaPredicted RBP7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 SIT1Q9Y3P8 196 aa7.69□□□□□ -1.18
SMCHD1-207ENST00000581711 CYR61O00622 381 aa7.68□□□□□ -1.18
SMCHD1-207ENST00000581711 KRTAP1-1Q07627 177 aa7.68□□□□□ -1.18
SMCHD1-207ENST00000581711 MCTP2Q6DN12 878 aa7.68□□□□□ -1.18
SMCHD1-207ENST00000581711 KYQ8NBH2 561 aa7.68□□□□□ -1.18
SMCHD1-207ENST00000581711 ADCY4Q8NFM4 1077 aa7.68□□□□□ -1.18
SMCHD1-207ENST00000581711 USP33Q8TEY7 942 aa7.68□□□□□ -1.18
SMCHD1-207ENST00000581711 GIPC2Q8TF65 315 aa7.68□□□□□ -1.18
SMCHD1-207ENST00000581711 SPON2Q9BUD6 331 aa7.68□□□□□ -1.18
SMCHD1-207ENST00000581711 ERCC3P19447 782 aa7.67□□□□□ -1.18
SMCHD1-207ENST00000581711 GUCY2CP25092 1073 aa7.67□□□□□ -1.18
SMCHD1-207ENST00000581711 SEPHS1P49903 392 aa7.67□□□□□ -1.18
SMCHD1-207ENST00000581711 ETV3LQ6ZN32 361 aa7.67□□□□□ -1.18
SMCHD1-207ENST00000581711 CPNE8Q86YQ8 564 aa7.67□□□□□ -1.18
SMCHD1-207ENST00000581711 RNF34Q969K3 372 aa7.67□□□□□ -1.18
SMCHD1-207ENST00000581711 FERD3LQ96RJ6 166 aa7.67□□□□□ -1.18
SMCHD1-207ENST00000581711 WHRNQ9P202 907 aa7.67□□□□□ -1.18
SMCHD1-207ENST00000581711 NTRK1P04629 796 aa7.66□□□□□ -1.18
SMCHD1-207ENST00000581711 RUFY4Q6ZNE9 571 aa7.66□□□□□ -1.18
SMCHD1-207ENST00000581711 TXNDC5Q8NBS9 432 aaKnown RBP7.66□□□□□ -1.18
SMCHD1-207ENST00000581711 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMCHD1-207ENST00000581711 VAMP4O75379 141 aa7.65□□□□□ -1.18
SMCHD1-207ENST00000581711 ICAM4Q14773 271 aa7.65□□□□□ -1.18
SMCHD1-207ENST00000581711 DPY19L1Q2PZI1 675 aa7.65□□□□□ -1.18
SMCHD1-207ENST00000581711 FAM26EQ8N5C1 309 aa7.65□□□□□ -1.18
SMCHD1-207ENST00000581711 TTLL6Q8N841 843 aa7.65□□□□□ -1.18
SMCHD1-207ENST00000581711 HAUS7Q99871 368 aa7.65□□□□□ -1.18
SMCHD1-207ENST00000581711 SLITRK6Q9H5Y7 841 aa7.65□□□□□ -1.18
SMCHD1-207ENST00000581711 BACE2Q9Y5Z0 518 aa7.65□□□□□ -1.18
SMCHD1-207ENST00000581711 NPHP3-ACAD11A0A0J9YXS1 232 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 C2orf71A6NGG8 1288 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 LAMTOR5O43504 91 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 FZD7O75084 574 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 PRR31Q5SQ13 230 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 FBXW10Q5XX13 1052 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 STK32CQ86UX6 486 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 DCP2Q8IU60 420 aaKnown RBP7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 RBBP8NLQ8NC74 664 aaPredicted RBP7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 LCORQ96JN0 433 aaPredicted RBP7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 ZNF747Q9BV97 191 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 PODXL2Q9NZ53 605 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 PPP4R1LQ9P1A2 415 aa7.64□□□□□ -1.19
SMCHD1-207ENST00000581711 C7orf72A4D263 438 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 DDX3XO00571 662 aaKnown RBP eCLIP7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 B4GALT3O60512 393 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 FUCA1P04066 466 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 PAMP19021 973 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 ITGA1P56199 1179 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 MRPL58Q14197 206 aaKnown RBP7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 CD300LDQ6UXZ3 194 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 MIB1Q86YT6 1006 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 CDK5RAP1Q96SZ6 601 aaKnown RBP7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 KLC2Q9H0B6 622 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 KLHL25Q9H0H3 589 aa7.63□□□□□ -1.19
SMCHD1-207ENST00000581711 LTBP3Q9NS15 1303 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 TRBV23OR9-2A0A075B6M9 112 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 NPHS1O60500 1241 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 ZNF16P17020 682 aaPredicted RBP7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 SURF1Q15526 300 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 USP51Q70EK9 711 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 GBP3Q9H0R5 595 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 VPS11Q9H270 941 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 CD248Q9HCU0 757 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 PPT2Q9UMR5 302 aa7.62□□□□□ -1.19
SMCHD1-207ENST00000581711 AMPD2Q01433 879 aa7.61□□□□□ -1.19
SMCHD1-207ENST00000581711 CRB2Q5IJ48 1285 aa7.61□□□□□ -1.19
SMCHD1-207ENST00000581711 ZC3H18Q86VM9 953 aaKnown RBP7.61□□□□□ -1.19
SMCHD1-207ENST00000581711 PLEKHO2Q8TD55 490 aa7.61□□□□□ -1.19
SMCHD1-207ENST00000581711 AP5M1Q9H0R1 490 aa7.61□□□□□ -1.19
SMCHD1-207ENST00000581711 CGGBP1Q9UFW8 167 aaPredicted RBP7.61□□□□□ -1.19
SMCHD1-207ENST00000581711 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
SMCHD1-207ENST00000581711 RBM10P98175 930 aaKnown RBP7.6□□□□□ -1.19
SMCHD1-207ENST00000581711 HEATR6Q6AI08 1181 aaKnown RBP7.6□□□□□ -1.19
SMCHD1-207ENST00000581711 PLEKHH3Q7Z736 793 aa7.6□□□□□ -1.19
SMCHD1-207ENST00000581711 PCED1AQ9H1Q7 454 aa7.6□□□□□ -1.19
SMCHD1-207ENST00000581711 CCDC9Q9Y3X0 531 aaKnown RBP7.6□□□□□ -1.19
SMCHD1-207ENST00000581711 GPR42O15529 346 aa7.59□□□□□ -1.19
SMCHD1-207ENST00000581711 SGSM2O43147 1006 aa7.59□□□□□ -1.19
SMCHD1-207ENST00000581711 GNPTABQ3T906 1256 aa7.59□□□□□ -1.19
SMCHD1-207ENST00000581711 ZNF326Q5BKZ1 582 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-207ENST00000581711 ADAT2Q7Z6V5 191 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-207ENST00000581711 DNERQ8NFT8 737 aa7.59□□□□□ -1.19
SMCHD1-207ENST00000581711 MARCH2Q9P0N8 246 aa7.59□□□□□ -1.19
SMCHD1-207ENST00000581711 NPEPPSL1A6NEC2 478 aa7.58□□□□□ -1.2
SMCHD1-207ENST00000581711 PPM1BO75688 479 aa7.58□□□□□ -1.2
SMCHD1-207ENST00000581711 AMHP03971 560 aa7.58□□□□□ -1.2
SMCHD1-207ENST00000581711 EPHX1P07099 455 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms