RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 SESTD1Q86VW0 696 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 STAG1Q8WVM7 1258 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 PRRX2Q99811 253 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 C17orf80Q9BSJ5 609 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 NBNO60934 754 aa16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 CHGBP05060 677 aa16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 ALDH5A1P51649 535 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 PTGISQ16647 500 aa16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 HSP90AB4PQ58FF6 505 aa16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 ZKSCAN2Q63HK3 967 aa16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 SP7Q8TDD2 431 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 PPP1R13LQ8WUF5 828 aa16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 DHX38Q92620 1227 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 RIF1Q5UIP0 2472 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-219ENST00000581660 MYO7AQ13402 2215 aa16.49■□□□□ 0.23
CSNK1D-219ENST00000581660 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-219ENST00000581660 PKN1Q16512 942 aa16.49■□□□□ 0.23
CSNK1D-219ENST00000581660 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-219ENST00000581660 BANK1Q8NDB2 785 aa16.49■□□□□ 0.23
CSNK1D-219ENST00000581660 PUS7LQ9H0K6 701 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-219ENST00000581660 INSL6Q9Y581 213 aa16.49■□□□□ 0.23
CSNK1D-219ENST00000581660 COL4A6Q14031 1691 aa16.49■□□□□ 0.23
CSNK1D-219ENST00000581660 TCF15Q12870 199 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 PPP2R5BQ15173 497 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 SMAD2Q15796 467 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 TCEAL5Q5H9L2 206 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 EDAQ92838 391 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 SAMD11Q96NU1 681 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 ZNF287Q9HBT7 754 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 MUTYHQ9UIF7 546 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 MYO15AQ9UKN7 3530 aa16.48■□□□□ 0.23
CSNK1D-219ENST00000581660 MICAL3Q7RTP6 2002 aa16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 GSG1L2A8MUP6 293 aa16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 ATP5JP18859 108 aa16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 IKBKEQ14164 716 aa16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 IER5LQ5T953 404 aa16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 GDF6Q6KF10 455 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 NEDD1Q8NHV4 660 aa16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 SCFD2Q8WU76 684 aa16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 HAUS7Q99871 368 aa16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-219ENST00000581660 H3BNC9 293 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 NCK2O43639 380 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 GFRA3O60609 400 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 ICAM1P05362 532 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 CKBP12277 381 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 EDNRBP24530 442 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 LTBRP36941 435 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 SLC1A4P43007 532 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 BAATQ14032 418 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 EPC2Q52LR7 807 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 ZSCAN25Q6NSZ9 544 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 FAM117BQ6P1L5 589 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 TRAF7Q6Q0C0 670 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 RNF135Q8IUD6 432 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 STK11IPQ8N1F8 1099 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 BOLA2Q9H3K6 86 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 PRR12Q9ULL5 1215 aa16.46■□□□□ 0.23
CSNK1D-219ENST00000581660 FAM186AA6NE01 2351 aa16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 PRDM1O75626 825 aa16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 ALG13Q9NP73 1137 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 ISY1Q9ULR0 285 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 KMT2EQ8IZD2 1858 aa16.45■□□□□ 0.22
CSNK1D-219ENST00000581660 MCCP23508 829 aa16.44■□□□□ 0.22
CSNK1D-219ENST00000581660 SNAP25P60880 206 aa16.44■□□□□ 0.22
CSNK1D-219ENST00000581660 MBTPS1Q14703 1052 aa16.44■□□□□ 0.22
CSNK1D-219ENST00000581660 ITPRIPQ8IWB1 547 aa16.44■□□□□ 0.22
CSNK1D-219ENST00000581660 KAT2BQ92831 832 aa16.44■□□□□ 0.22
CSNK1D-219ENST00000581660 COPS5Q92905 334 aa16.44■□□□□ 0.22
CSNK1D-219ENST00000581660 CLDND1Q9NY35 253 aa16.44■□□□□ 0.22
CSNK1D-219ENST00000581660 TMEM221A6NGB7 291 aa16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 M0R296 226 aa16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 NFIBO00712 420 aa16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 GPM6BQ13491 265 aa16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 TRIM71Q2Q1W2 868 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 RCSD1Q6JBY9 416 aa16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 TRIM67Q6ZTA4 783 aa16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 RPAINQ86UA6 219 aa16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 RANBP17Q9H2T7 1088 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 EPB41L4AQ9HCS5 686 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-219ENST00000581660 GTF2IRD1Q9UHL9 959 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms